Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L07
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 207 3e-54
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 207 4e-54
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 207 4e-54
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 205 1e-53
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 205 2e-53
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 204 3e-53
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 204 4e-53
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 198 1e-51
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 195 1e-50
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 82 2e-16
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 80 1e-15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 80 1e-15
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 77 1e-14
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 77 1e-14
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 77 1e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 46 2e-05
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 43 1e-04
At5g56950.1 68418.m07109 nucleosome assembly protein (NAP), puta... 35 0.040
At4g26110.1 68417.m03759 nucleosome assembly protein (NAP), puta... 33 0.091
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 31 0.37
At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051... 31 0.49
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 31 0.64
At3g03140.1 68416.m00310 expressed protein 31 0.64
At4g05420.1 68417.m00824 UV-damaged DNA-binding protein, putativ... 30 0.85
At3g50690.1 68416.m05546 leucine-rich repeat family protein 30 0.85
At2g34030.1 68415.m04166 calcium-binding EF hand family protein ... 30 0.85
At4g08810.1 68417.m01450 expressed protein 30 1.1
At3g47490.2 68416.m05164 HNH endonuclease domain-containing prot... 30 1.1
At3g47490.1 68416.m05165 HNH endonuclease domain-containing prot... 30 1.1
At2g19480.1 68415.m02277 nucleosome assembly protein (NAP), puta... 30 1.1
At1g73080.1 68414.m08450 leucine-rich repeat transmembrane prote... 29 1.5
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At5g54250.2 68418.m06758 cyclic nucleotide-regulated ion channel... 29 2.6
At5g54250.1 68418.m06757 cyclic nucleotide-regulated ion channel... 29 2.6
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 29 2.6
At4g21100.1 68417.m03051 UV-damaged DNA-binding protein, putativ... 28 3.4
At4g20920.1 68417.m03032 double-stranded RNA-binding domain (DsR... 28 3.4
At5g60130.1 68418.m07538 transcriptional factor B3 family protei... 28 4.5
At5g40570.1 68418.m04923 surfeit locus protein 2 family protein ... 28 4.5
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 28 4.5
At4g11800.1 68417.m01879 calcineurin-like phosphoesterase family... 28 4.5
At3g15357.1 68416.m01947 expressed protein 28 4.5
At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/PO... 27 6.0
At3g09000.1 68416.m01053 proline-rich family protein 27 6.0
At2g37585.1 68415.m04611 glycosyltransferase family 14 protein /... 27 6.0
At1g47500.1 68414.m05272 RNA-binding protein 47 (RBP47), putativ... 27 6.0
At1g22110.1 68414.m02764 expressed protein 27 6.0
At5g66540.1 68418.m08389 expressed protein ; supported by full-L... 27 7.9
At4g32700.1 68417.m04655 DNA-directed DNA polymerase family prot... 27 7.9
At3g59510.1 68416.m06641 leucine-rich repeat family protein cont... 27 7.9
At3g15410.1 68416.m01955 leucine-rich repeat family protein cont... 27 7.9
At2g30505.1 68415.m03716 Expressed protein 27 7.9
At2g24340.1 68415.m02909 hypothetical protein 27 7.9
At1g02810.1 68414.m00239 pectinesterase family protein contains ... 27 7.9
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 207 bits (506), Expect = 3e-54
Identities = 89/112 (79%), Positives = 108/112 (96%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
+IQNKNSSYFVEWIPNNVK++VCDIPPKGLKM++TF+GN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 333 NIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRR 392
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
KAFLHWYTGEGMDEMEF EAESN+NDLV+EYQQYQDATA+++ E+D E+ EE
Sbjct: 393 KAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEGEYDVEEEEE 444
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 207 bits (505), Expect = 4e-54
Identities = 89/119 (74%), Positives = 109/119 (91%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVK+ VCDIPP GLKM+STFIGN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHH 358
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATA+++ +++ E+ E Q+E +
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEEGEYQQEEEY 450
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 207 bits (505), Expect = 4e-54
Identities = 89/119 (74%), Positives = 109/119 (91%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVK+ VCDIPP GLKM+STFIGN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHH 358
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATA+++ +++ E+ E Q+E +
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEEGEYQQEEEY 450
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 205 bits (501), Expect = 1e-53
Identities = 88/111 (79%), Positives = 106/111 (95%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVK+ VCDIPP GLKM+STFIGN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDME 334
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATA+++ E+++E+ E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEEEEAE 442
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 205 bits (500), Expect = 2e-53
Identities = 86/109 (78%), Positives = 106/109 (97%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVK++VCDIPP G+KM+STF+GN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 333 NVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMFRR 392
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATA+++ E+D+E+
Sbjct: 393 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEDEYDEEE 441
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 204 bits (498), Expect = 3e-53
Identities = 90/118 (76%), Positives = 109/118 (92%), Gaps = 1/118 (0%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVK++VCDI P+GL M+STFIGN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ-EDMEELAQDE 352
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATA+D+ E+++ ED EE+ E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADDEGEYEEDEDEEEILDHE 449
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 204 bits (497), Expect = 4e-53
Identities = 89/117 (76%), Positives = 107/117 (91%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVK+ VCDIPP GLKM+STFIGN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATA+++ ++ E+ E Q+E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEEGYEYEEDEVEVQEE 448
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 198 bits (484), Expect = 1e-51
Identities = 88/111 (79%), Positives = 106/111 (95%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
+IQNKNSSYFVEWIPNNVK++VCDI PKGLKM+STFIGN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 332 NIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDME 334
KAFLHWYTGEGMDEMEF EAESN+NDLV+EYQQYQDATA ++ E+++E+ E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAGEE-EYEEEEEE 441
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 195 bits (476), Expect = 1e-50
Identities = 87/112 (77%), Positives = 104/112 (92%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVK++VCDI P GLKM+STFIGN+T+IQE+F+R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDAT-AEDDTEFDQEDME 334
KAFLHWYTGEGMDEMEF EAESN+NDLV+EYQQYQDAT E++ E D+E+ E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATVGEEEYEEDEEEEE 443
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.2 bits (194), Expect = 2e-16
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + I N TA+ E+F RI
Sbjct: 334 AIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQE 325
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ AEDD E E
Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGGEGAEDDDEEGDE 449
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.8 bits (188), Expect = 1e-15
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + I N TA+ E+F RI
Sbjct: 334 TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ A DD E + ED
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV-GAEGGDDEEDEGED 449
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.8 bits (188), Expect = 1e-15
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + I N TA+ E+F RI
Sbjct: 334 TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ A DD E + ED
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV-GAEGGDDEEDEGED 449
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + I N+T++ E+F RI
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQE 325
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +D+ + +E
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGGDDEDDEGEE 449
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + I N+T++ E+F RI
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQE 325
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +D+ + +E
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGGDDEDDEGEE 449
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + I N+T++ E+F RI
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQE 325
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +D+ + +E
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGGDDEDDEGEE 449
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 45.6 bits (103), Expect = 2e-05
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Frame = +2
Query: 5 IQNKNSSYFVEWIPNNVKTAVCDIPP---KGLKMSSTFIGNTTAIQELFKRISEQFSAMF 175
I+ + F+EW P +++ A+ P ++S + + T+I+ LF + Q+ +
Sbjct: 342 IRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLR 401
Query: 176 RRKAFLHWYTGEGM----DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELA 343
+++AFL Y M D EF+E+ + LV EY+ + + D ++ ED E+L
Sbjct: 402 KKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACE---SPDYIKWGMEDPEQLM 458
Query: 344 QDE 352
E
Sbjct: 459 TGE 461
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +2
Query: 5 IQNKNSSYFVEWIPNNVKTAVCDIPP---KGLKMSSTFIGNTTAIQELFKRISEQFSAMF 175
I+ + F++W P +++ A+ P ++S + + T+I+ LF R Q+ +
Sbjct: 342 IRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGLMLASHTSIRHLFSRCLSQYDKLR 401
Query: 176 RRKAFLHWYTGEGM----DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELA 343
+++AFL Y M D EF+E+ + LV EY+ + + D ++ ED +L
Sbjct: 402 KKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACE---SPDYIKWGMEDPGQLM 458
Query: 344 QDE 352
E
Sbjct: 459 TGE 461
>At5g56950.1 68418.m07109 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 374
Score = 34.7 bits (76), Expect = 0.040
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 197 WYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
W+TGE ++ EF E +++ D + E + + ++D E D ED EE
Sbjct: 293 WFTGEAIEGEEF-EIDNDDEDDIDEDEDEDEEDEDEDEEEDDEDEEE 338
>At4g26110.1 68417.m03759 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 372
Score = 33.5 bits (73), Expect = 0.091
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 197 WYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
W+TGE M+ +F E + + D + E + +D ED+ + D ED EE
Sbjct: 294 WFTGEAMEAEDF-EIDDDEEDDIDEDEDEED--EEDEEDDDDEDEEE 337
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -2
Query: 267 ETKSLTLLSASLNSISSMPSPVYQCKKALRLNIAENCSDILLNSSWMAVVLPMNVEDILR 88
E +SLT L A ++ +PS + Q KK RL++ C +L + + +LR
Sbjct: 714 ELESLTTLLADFTALREIPSTINQLKKLKRLSL-NGCKGLLSDDIDNLYSEKSHSVSLLR 772
Query: 87 P--LGGMSHTAVFTL 49
P L G+++ + +L
Sbjct: 773 PVSLSGLTYMRILSL 787
>At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF05178:
Krr1 family
Length = 638
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 215 MDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEH 355
MDE +EAE+ N + +Y Q +++ +E+++EL++D+H
Sbjct: 206 MDEYYGDEAEATENQFLKDYLVKQLWKEKEERVPGEEELKELSEDDH 252
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 30.7 bits (66), Expect = 0.64
Identities = 28/98 (28%), Positives = 42/98 (42%)
Frame = +3
Query: 57 RPPCVTSRLKASRCPRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPARAWTRWNST 236
R P + + SR P + PSRS +R S R S +P+R+ R +S
Sbjct: 474 RSPLRSPKRVISRSPVRGRIARSPSRSPVRSASRGSLGRGPLRRSSRRSPSRSPVR-SSR 532
Query: 237 RRRAMSMIWFRNTSSTRTRPLKMTRNLTRKIWRSSLKT 350
R + S I S +R+ R+L+R RS K+
Sbjct: 533 RSLSRSPIQLSRRSLSRSPTRLSRRSLSRSPIRSPRKS 570
>At3g03140.1 68416.m00310 expressed protein
Length = 769
Score = 30.7 bits (66), Expect = 0.64
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 17 NSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFK-RISEQFSAMFRRKAFL 193
+SSY PNN + V + KG + T + ++L + R+ + ++R+AF
Sbjct: 369 DSSYLYSQNPNNEASTVSNWQHKGKRNFRTLPRRSARKRKLHRNRLEDGRYCEYKRRAFG 428
Query: 194 HWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 289
G G+D N+ +D +Q+ D
Sbjct: 429 QKPMGYGLDFNGINDMSDGTDDTDPNERQFGD 460
>At4g05420.1 68417.m00824 UV-damaged DNA-binding protein, putative
similar to UV-damaged DNA binding protein (GI:12082087)
[Oryza sativa]; contains Pfam PF03178 : CPSF A subunit
region
Length = 1088
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 401 VTRFHRWEV*NRFNHGARLERAPPYLPGQIPCHLQRSRPGTAGI 270
V +H E NRF HG+ + R P GQIP + + G G+
Sbjct: 954 VGEYHLGEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGV 997
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 218 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
D+ E E E ++ V E + +D+ E+D D+ED EE ++E D
Sbjct: 262 DDSESGEEEVGEDNDVVEVHEIEDSENEEDGVDDEEDDEEDEEEEEVD 309
>At2g34030.1 68415.m04166 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 566
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTE 313
KAFL + G+ E+E NE E + L+ +Y+ + E+ TE
Sbjct: 343 KAFLEDFDGDNDGELEENEFEEGIARLLKQYKFNVEDQRENQTE 386
>At4g08810.1 68417.m01450 expressed protein
Length = 552
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 144 REYQSSSPLCSDARLSCTGTPARAWTRWNSTRRRAMSMIWFRNTSSTRTRPLKMTRNLTR 323
R Y L A + G R W +WN +R + + R + R PL+++++ +
Sbjct: 309 RYYFDFEHLKETASIVEEGEFLRDWKKWNRLHKRKVPV---RKVKTHRVSPLQLSKDKST 365
Query: 324 KIWR 335
IWR
Sbjct: 366 IIWR 369
>At3g47490.2 68416.m05164 HNH endonuclease domain-containing protein
contains Pfam domain PF01844: HNH endonuclease
Length = 176
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 99 PRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPAR 212
P+HS++ P P+R R SSSP + LS +G+P R
Sbjct: 35 PQHSAMKPDPTRRRNRALSSSSPSKTRPELS-SGSPNR 71
>At3g47490.1 68416.m05165 HNH endonuclease domain-containing protein
contains Pfam domain PF01844: HNH endonuclease
Length = 234
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 99 PRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPAR 212
P+HS++ P P+R R SSSP + LS +G+P R
Sbjct: 35 PQHSAMKPDPTRRRNRALSSSSPSKTRPELS-SGSPNR 71
>At2g19480.1 68415.m02277 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 379
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 197 WYTGEGM--DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
W+TGE + D+++ + + +++ E + D EDD E D ED +E
Sbjct: 293 WFTGEAVEADDLDIEDDDDEIDEDDDEEDEEDD---EDDEEEDDEDDDE 338
>At1g73080.1 68414.m08450 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
GI:1389566 from [Arabidopsis thaliana]
Length = 1123
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 267 ETKSLTLLSASLNSIS-SMPSPVYQCKKALRLNIAEN 160
E KSL +L S N+ S ++PS + C K L+++EN
Sbjct: 97 ELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSEN 133
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +2
Query: 209 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
E + ++ N+AE + + +E + ++ AE+D E ++E+ EE ++E +
Sbjct: 55 EDQEVVKPNDAEEDDDGDDAEEDEEEEVEAEEDEEAEEEEEEEEEEEEEEE 105
>At5g54250.2 68418.m06758 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC4) identical to
cyclic nucleotide and calmodulin-regulated ion channel
(cngc4) GI:4581203 from [Arabidopsis thaliana]
Length = 694
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 221 EMEFNEAESNVNDLVSE-YQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
E EF A D S Y +D T E+D E +E+MEE+ ++E +
Sbjct: 4 EQEFTRASRFSRDSSSVGYYSEEDNTEEEDEE--EEEMEEIEEEEEEE 49
>At5g54250.1 68418.m06757 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC4) identical to
cyclic nucleotide and calmodulin-regulated ion channel
(cngc4) GI:4581203 from [Arabidopsis thaliana]
Length = 694
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 221 EMEFNEAESNVNDLVSE-YQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
E EF A D S Y +D T E+D E +E+MEE+ ++E +
Sbjct: 4 EQEFTRASRFSRDSSSVGYYSEEDNTEEEDEE--EEEMEEIEEEEEEE 49
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 300 KMTRNLTRKIWRSSLKTSTMIKSVLYLPSMKSCYLRIW 413
K +NL KI RSS+++S+ S+ PS+ S R W
Sbjct: 22 KKHKNLQLKICRSSIESSSSSSSLSSPPSLSSPISRTW 59
>At4g21100.1 68417.m03051 UV-damaged DNA-binding protein, putative
similar to UV-damaged DNA binding protein (GI:12082087)
[Oryza sativa] and damage-specific DNA binding protein 1,
Homo sapiens, PIR2:I38908; contains Pfam PF03178 : CPSF A
subunit region
Length = 1088
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 401 VTRFHRWEV*NRFNHGARLERAPPYLPGQIPCHLQRSRPGTAGI 270
V +H E NRF HG+ + + P GQIP + + G G+
Sbjct: 954 VGEYHIGEFVNRFRHGSLVMKLPDSDIGQIPTVIFGTVSGMIGV 997
>At4g20920.1 68417.m03032 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 870
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 NIRAVLRYVQTQGFLALVHRRG-HGRDGIQRGGEQC 252
NI ++Y+ + FL++ H G H R +QR GE+C
Sbjct: 93 NIVERIKYIFSDEFLSVDHPLGGHLRAALQRDGERC 128
>At5g60130.1 68418.m07538 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 300
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 209 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 349
E D+ ++N E N +D +Y + A +DD + D ED++ +A D
Sbjct: 121 EDDDDSDYNCGEDNDSD---DYAD-EAAVEKDDNDADDEDVDNVADD 163
>At5g40570.1 68418.m04923 surfeit locus protein 2 family protein /
SURF2 family protein contains Pfam profile PF05477:
Surfeit locus protein 2 (SURF2)
Length = 204
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 218 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
+E + N N D SE + + D+E D+E EE + H D
Sbjct: 121 EETQVNNPRHNKEDSGSEESDFWMPKSSSDSELDEETDEENCKGSHCD 168
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 200 YTGEGMDEMEFNEAESNVNDLVSEYQQY 283
Y G G+DEM NEA N L+ + Q++
Sbjct: 412 YQGIGLDEMLLNEATENTGLLLVQVQRF 439
>At4g11800.1 68417.m01879 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 1012
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 418 IYHILK*QDF-IDGRYRTDLIMVLVLSELLHIFLVKFRVIFSGRVLVLLVFR 266
+YH+ Q +D R L + + +S +L FLV F +IF G V LV R
Sbjct: 93 LYHLPNFQSMGLDLRMNLSLFLTIYISSIL--FLVVFHIIFLGLWYVGLVSR 142
>At3g15357.1 68416.m01947 expressed protein
Length = 143
Score = 27.9 bits (59), Expect = 4.5
Identities = 8/26 (30%), Positives = 21/26 (80%)
Frame = +2
Query: 284 QDATAEDDTEFDQEDMEELAQDEHHD 361
+DA +E+DT+FD+++++++ ++ D
Sbjct: 100 KDADSEEDTDFDEDEIDDVDFEDDED 125
>At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to Speckle-type POZ protein (SP:O43791) [Homo
sapiens]
Length = 368
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 90 SRCPRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPARAWTRWNSTRRRAMS 254
SRC R + SR C+ Q PLCS + + RW R +S
Sbjct: 296 SRCKRMWQLLELHSRICVDSEQCKVPLCSSLKERMKTQSRKDEKRWKLLVRNVLS 350
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 27.5 bits (58), Expect = 6.0
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = +3
Query: 9 KTRTHRTSWNGSRIT*RPPCVTSRLKASR--CPRHSSVTPQPSRSCLREYQSSSPLCSDA 182
K +T +S G R RP S SR P S TP S S ++S+ S
Sbjct: 133 KPQTSSSSVAGLR---RPSSSGSSRSTSRPATPTRRSTTPTTSTSRPVTTRASNSRSSTP 189
Query: 183 RLSCTGTPARAWTRWNSTRRRAMSMIWFRNTSSTRTRPLKMTRNLTRKIWRSSLKT 350
T T ARA T + R S R+ + TR+ P + + + + R + T
Sbjct: 190 TSRATLTAARATTSTAAPRTTTTSSGSARSATPTRSNPRPSSASSKKPVSRPATPT 245
>At2g37585.1 68415.m04611 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 384
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 191 LHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
LH+ + + + N N D+V + EDD D+ D+E L Q +
Sbjct: 292 LHYTKWDPLQQRTLNVTVENFRDMVQSGAPFAREFREDDLVLDKIDIELLGQTD 345
>At1g47500.1 68414.m05272 RNA-binding protein 47 (RBP47), putative
similar to DNA binding protein GI:1899187 from
[Nicotiana tabacum]
Length = 434
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 335 PPYLPGQIPCHLQRSRPGTAGIPKPNH 255
PPY P P ++ ++P T+ P P H
Sbjct: 25 PPYPPPHPPVEVEENQPKTSPTPPPPH 51
>At1g22110.1 68414.m02764 expressed protein
Length = 282
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 242 ESNVNDLVSEYQQYQDATAEDDTEFDQED 328
+ +V DL E YQ EDD E D ED
Sbjct: 163 DDDVFDLPQEPSHYQSDDEEDDDECDDED 191
>At5g66540.1 68418.m08389 expressed protein ; supported by
full-Length cDNA gi:12057175 from [Arabidopsis thaliana]
Length = 524
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +2
Query: 209 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
+ +DEM+ + +S+ D + + D+ ED+ E ++++ EE ++E +
Sbjct: 109 DDIDEMDMDGFDSDDVDDEDKEIESNDSEGEDEEEEEEDEEEEEEEEEEEE 159
>At4g32700.1 68417.m04655 DNA-directed DNA polymerase family protein
similar to DNA helicase HEL308 [Homo sapiens]
GI:19110782; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00476: DNA polymerase family A
Length = 1548
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 216 MPSPVYQCKKALRLNIAENCSDILLNSSWM 127
+ SP ++ RLN+ E D L++ SW+
Sbjct: 1002 LKSPAISIQRCTRLNLPEGIRDELVDGSWL 1031
>At3g59510.1 68416.m06641 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 419
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 258 SLTLLSASLNSISSMPSPVYQCKKALRLNIAEN 160
SL LS NS++ SP+++ K+ + L++++N
Sbjct: 236 SLRTLSLCFNSLAGRISPLHRLKQLVSLDVSQN 268
>At3g15410.1 68416.m01955 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596;
identical to leucine-rich repeat protein [Arabidopsis
thaliana] gi|2760084|emb|CAA76000
Length = 584
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 255 LTLLSASLNSISSMPSPVYQCKKALRLNIAEN 160
L+ L A+ N ISS+P + C K +L++ N
Sbjct: 139 LSDLKATNNQISSLPEDMVNCSKLSKLDVEGN 170
>At2g30505.1 68415.m03716 Expressed protein
Length = 321
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = -2
Query: 246 LSASLNSISSMPSPVYQCKKALRLNIAENCSDILLNSSWMAVVLPMNVED 97
LSA+ + S +P + K RL+IA++ +D+L+N++ V+ N D
Sbjct: 156 LSANSSIKSILPQVLVTNLKFSRLDIAKSSTDLLMNANLNTVLQLSNNND 205
>At2g24340.1 68415.m02909 hypothetical protein
Length = 322
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 86 GLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYT 205
GLK+ +T G T + E + + + +F+HW T
Sbjct: 186 GLKIGATTSGVKTKVDEDIEPLCRHYKCATMDSSFIHWIT 225
>At1g02810.1 68414.m00239 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 579
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 165 PLCSDARLSCTGTPARAWTR-WNSTRRRAMSMIWF--RNTSSTRTRPLKMTRN 314
PL +D +L G +T+ W +++ W R+ SST T+P ++ RN
Sbjct: 171 PLVNDTKL--LGVSLALFTKGWVPKKKKRAGFAWAQPRSGSSTHTKPFRLFRN 221
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,240,910
Number of Sequences: 28952
Number of extensions: 234782
Number of successful extensions: 1027
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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