Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L05
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.7  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 451 PPGNTGTGKHCQPPSTSARAPYAIRVPPSNMGFT*GCSLNLWNSL 317
           PP +T +G   Q P+T    P       SN+    G + N W SL
Sbjct: 64  PPSSTSSGSLGQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWESL 108


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -1

Query: 480 GNRLCRRPASRRGTPAPASIANRLPLAPELRTRFGCRLQTW 358
           G  L  +   ++G P  A+      LA     ++ C L+ W
Sbjct: 20  GRTLVEKGLRKQGVPREATKITLSSLAKGSLKQYTCELKLW 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,199
Number of Sequences: 336
Number of extensions: 3871
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)