Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L05
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 222 1e-58
10_05_0063 + 8708237-8708373,8708533-8708554 31 0.68
03_01_0341 + 2689367-2689619,2690520-2690782,2690865-2691033,269... 30 1.2
08_01_0213 - 1703682-1703696,1703824-1703919,1704033-1704104,170... 30 1.6
01_01_0238 - 1976645-1977561,1977649-1977909,1978243-1978275,198... 30 1.6
08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264 29 2.7
04_04_0031 - 22289078-22289521,22289702-22289754,22289839-222900... 29 2.7
02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938 29 2.7
06_03_1310 + 29238644-29240260 24 3.3
11_01_0184 - 1444246-1444434,1446291-1446719 29 3.6
02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072 29 3.6
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 29 3.6
01_01_0611 + 4541505-4541646,4543503-4543621,4543728-4543866,454... 29 3.6
07_01_0920 + 7749937-7750264,7750416-7750546,7751686-7751747,775... 28 4.8
05_03_0486 + 14616354-14617200,14617288-14617329,14619433-14620508 28 4.8
01_06_1539 + 38107108-38109649,38110563-38110915 28 4.8
07_03_1635 + 28286133-28286831 28 6.3
07_03_0480 + 18567759-18567956,18568140-18569226,18570025-18570380 28 6.3
04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985 28 6.3
12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009 27 8.4
12_01_0950 - 9463148-9464358,9465326-9465644 27 8.4
10_01_0017 - 218188-218261,219262-219379,220348-220932,220996-22... 27 8.4
07_01_0983 + 8287866-8287871,8289353-8289583,8289647-8290408 27 8.4
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 27 8.4
01_06_1088 - 34439311-34439987,34440080-34440136,34442790-344429... 27 8.4
01_06_0851 + 32455364-32458050,32458883-32458922 27 8.4
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 222 bits (543), Expect = 1e-58
Identities = 99/189 (52%), Positives = 137/189 (72%), Gaps = 2/189 (1%)
Frame = +3
Query: 15 KITIFAEGCHGHLTKMVSGKYNLRE--KSEPQSYGIGLKELWEVKPENHKPGLVEHTIGW 188
++T+ AEGC G L++ + + LRE + + Q+Y +G+KE+WE++ HKPG V HT+GW
Sbjct: 177 RMTLLAEGCRGSLSEKIIRNHKLRESGQGQHQTYALGIKEVWEIEEGKHKPGSVIHTVGW 236
Query: 189 PLDKNTYGGSFIYHLNVAEGEAPLVATGFVVGLDYSNPYLSPFREFQRFKLHPYVKPMFE 368
PLD TYGGSF+YHL+ + +A G VV L+Y NP++SP+ EFQ+FK HP V+ + +
Sbjct: 237 PLDSKTYGGSFMYHLDDRQ-----LAIGLVVALNYQNPFMSPYDEFQKFKQHPAVRTILD 291
Query: 369 GGTRIAYGARALVEGGWQCLPVPVFPGGMLAGDTAGYLNVPRIKGTHNAMKSGMLAAEAA 548
GGT + YGAR L EGG+Q +P PVFPGG + G +AG+LNVP+IKGTH AMKSGMLAAEA
Sbjct: 292 GGTVLQYGARTLNEGGFQSIPNPVFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAT 351
Query: 549 MDLILSGEA 575
++ G +
Sbjct: 352 FKTLVEGSS 360
>10_05_0063 + 8708237-8708373,8708533-8708554
Length = 52
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 463 PASIPPGNTGTGKHCQPPSTSARAPYAIRVP 371
PAS P G G H QPP T +P++ R P
Sbjct: 15 PASRSPRPVGGGVHGQPPPTPMSSPFSSRKP 45
>03_01_0341 +
2689367-2689619,2690520-2690782,2690865-2691033,
2691129-2691218,2691658-2691950,2692037-2692261
Length = 430
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 12 SKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKEL-WEVKPENHKPGLVEH-TIG 185
S ++ +G G+L Y L EKS+ S+G+ L EL +P + +VE T
Sbjct: 296 SHVSTQVKGTAGYLDPEYLRTYQLNEKSDVYSFGVLLVELITGRRPIEPRRAIVERVTAK 355
Query: 186 WPLDKNTYGGS 218
W ++K G +
Sbjct: 356 WAMEKFVEGNA 366
>08_01_0213 -
1703682-1703696,1703824-1703919,1704033-1704104,
1704372-1704444,1704508-1704710,1705058-1706330,
1706800-1706868,1706940-1707088,1707275-1707487,
1708385-1708669
Length = 815
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 451 PPGNTGTGKHCQPPSTSARAPYAIRVPPSNMGFT*GCS 338
PP + G H PP++ Y RV P G GCS
Sbjct: 40 PPASGGCSSHVTPPASGGGGCYGYRVTPPTSG---GCS 74
>01_01_0238 -
1976645-1977561,1977649-1977909,1978243-1978275,
1980556-1981345
Length = 666
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 33 EGCHGHLTKMVSGKYNLREKSEPQSYGIGLKELWEVKP 146
+G G+L M Y L +KS+ S+G+ L EL KP
Sbjct: 510 QGTPGYLDPMYHQCYQLTDKSDVYSFGVVLVELISSKP 547
>08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264
Length = 661
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 257 TSSYGLRRWTRLFQPLPEPVQRVPEV*TTSLCEAHV*RRHPNRVRSSGASGRRLAMLAG 433
TS+ GL RW+ F P P P + + +++ + +P V +S + + + L G
Sbjct: 297 TSTTGLSRWSEYFHPKPSPTTLLLDANESAMYQPDNGGSYPIHVAASNGTLKAVITLLG 355
>04_04_0031 -
22289078-22289521,22289702-22289754,22289839-22290092,
22290189-22290604,22290683-22290970
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 138 VKPENHKPGLVEHTIGWPL--DKNTYGGSFIYHLNVAEGEAPLVATGFVVGLDYSNPYLS 311
+ HK GLV +GW + +K I+H+N + P F G SN ++
Sbjct: 270 INVSGHKYGLVYAGVGWVIWRNKEDLPDELIFHINYLGADQPTFTLNFSKG---SNQIIA 326
Query: 312 PFREFQRFKLHPY 350
+ + R Y
Sbjct: 327 QYYQLIRLGFEGY 339
>02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938
Length = 463
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Frame = +3
Query: 363 FEGGTRIAYGARALVEGGW----QCLPVPVFP------GGM-LAGDTAGYLNVPRIKGTH 509
F+ TR+ A+ +EGG + P+P P G + L GD AGY+ +G +
Sbjct: 286 FQAATRLR--AKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGDAAGYVTKCSGEGIY 343
Query: 510 NAMKSGMLAAEA 545
A KSG + AEA
Sbjct: 344 FAAKSGRMCAEA 355
>06_03_1310 + 29238644-29240260
Length = 538
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 475 PAVSPASIPPGNTGTGKHCQPPSTSARAPYAIRVPPS 365
P +P + PP ++ T H PP + +PPS
Sbjct: 391 PRRTPPTPPPPSSPTPSHLPPPPPTYSESPKSSMPPS 427
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 283 PTTKPVATSGAS-PSATFRWYINEPPYVFLSKGHPIVCSTNPG 158
P+T P ++ GAS PS++ P YV P +T PG
Sbjct: 426 PSTSPPSSHGASPPSSSSSPPTEHPGYVLPPLTPPPPTTTPPG 468
>11_01_0184 - 1444246-1444434,1446291-1446719
Length = 205
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 366 EGGTRIAYGAR--ALVEGGWQCLPVPVFPGGMLAGDTAGYLNVPRIKGTHNAMKSG 527
EGG A G A VEGG + V PGG+ A G + ++G + G
Sbjct: 48 EGGEEGARGVEEAAAVEGGEEAAAVEGAPGGVEAAAVEGGVEAAAVEGGEEGARGG 103
>02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072
Length = 735
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 18 ITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKE-LWEVKPENHK----PGLVEH 176
+T +G G+L M S L EKS+ S+G+ L E L KP +++ GLV H
Sbjct: 566 VTTVIQGTLGYLDPMYSYTGRLTEKSDVFSFGVVLIELLTRKKPYSYRSPEDDGLVSH 623
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 486 R*GNRLCRRPASRRGTPAPASIANRLPLAPELRTR 382
R G L RP S PAPA+ A P AP+ RTR
Sbjct: 92 RSGTLLGERPESNSKAPAPAASAG--PAAPDPRTR 124
>01_01_0611 +
4541505-4541646,4543503-4543621,4543728-4543866,
4543924-4544178,4545094-4545212
Length = 257
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 451 PPGNTGTGKHCQPPSTSARAPYA 383
PP + G+G+HCQ + S+ AP A
Sbjct: 196 PPYDDGSGRHCQHYNVSSSAPSA 218
>07_01_0920 +
7749937-7750264,7750416-7750546,7751686-7751747,
7752007-7752070
Length = 194
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 211 PYVFLSKGHPIVCSTNPGLW 152
P VF S PI+CS +P +W
Sbjct: 77 PSVFSSSNQPILCSISPWIW 96
>05_03_0486 + 14616354-14617200,14617288-14617329,14619433-14620508
Length = 654
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 12 SKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKELWEVK 143
S ++ A+G G+L Y L +KS+ S+G+ L EL K
Sbjct: 517 SHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTCK 560
>01_06_1539 + 38107108-38109649,38110563-38110915
Length = 964
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 12 SKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKEL 131
S ++ FA G HG++ ++ + EKS+ S+GI L EL
Sbjct: 833 SPLSCFA-GTHGYMAPELAYSLKVTEKSDVYSFGIVLLEL 871
>07_03_1635 + 28286133-28286831
Length = 232
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 283 PTTKPVATSGASPS-ATFRWYINEPPYVFLSKGHP 182
P A +GA P+ Y N PPYV+LS +P
Sbjct: 134 PAPPLAADTGAVPAYLVVPCYANAPPYVYLSPANP 168
>07_03_0480 + 18567759-18567956,18568140-18569226,18570025-18570380
Length = 546
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 390 GARALVEGGWQCLPVPVFPGGMLAGDTAGYLN 485
G LV+G L + V+PG L +TAGY+N
Sbjct: 315 GRWILVDGDLGPLDIVVYPGLALYRETAGYVN 346
>04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985
Length = 773
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 9 HSKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKEL 131
H+ +T +G G+L L EKS+ S+G+ L EL
Sbjct: 594 HTHVTTLIQGTIGYLDPEYFQTSQLTEKSDVYSFGVVLAEL 634
>12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009
Length = 754
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 12 SKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKEL 131
S+ +F +G G+L + L E+S+ S+G+ L EL
Sbjct: 588 SEFILFVQGTMGYLDPESFTSHQLTERSDVYSFGVVLLEL 627
>12_01_0950 - 9463148-9464358,9465326-9465644
Length = 509
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 12 SKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKEL 131
S +T +G G+L M L EKS+ S+G+ L EL
Sbjct: 337 SGVTTVVQGTRGYLDPMYYYTGRLTEKSDVYSFGVILIEL 376
>10_01_0017 -
218188-218261,219262-219379,220348-220932,220996-221163,
221331-221333
Length = 315
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 21 TIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKELWEVKP 146
T+F G G++ + +L +KS+ S+G+ L EL KP
Sbjct: 148 TMFVVGSMGYIDPVFHKTGHLTQKSDVYSFGVVLLELISRKP 189
>07_01_0983 + 8287866-8287871,8289353-8289583,8289647-8290408
Length = 332
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 21 TIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKELWEVKP 146
T+F G G++ + +L +KS+ S+G+ L EL KP
Sbjct: 170 TMFVVGSMGYIDPVFHKTGHLTQKSDVYSFGVVLLELISRKP 211
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -3
Query: 466 SPA-SIPPGNTGTGKHCQPPSTSARAPYAIRVPPS 365
SP+ S PP NTG G P S AP A++ P+
Sbjct: 1182 SPSQSAPPANTGGGGSPPPSHGSPPAPKAVQSQPA 1216
>01_06_1088 -
34439311-34439987,34440080-34440136,34442790-34442919,
34443499-34443740,34443857-34444008,34444381-34444461,
34444547-34444612,34444692-34444763,34444843-34444984,
34445146-34445645,34446625-34447192,34447248-34447257
Length = 898
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +3
Query: 9 HSKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKELWEVKPENHKPGLVEHTIGW 188
H+ I+ A G G+L + L K++ S+GI L E+ +P H W
Sbjct: 719 HTHISTVAAGTLGYLDPEYHATFQLTVKTDVYSFGIVLLEIVTGQPPVFMDPQTVHLPNW 778
Query: 189 PLDKNTYG 212
K G
Sbjct: 779 VRQKIANG 786
>01_06_0851 + 32455364-32458050,32458883-32458922
Length = 908
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 9 HSKITIFAEGCHGHLTKMVSGKYNLREKSEPQSYGIGLKELWEVKP 146
H+ ++ +G G+L + L EKS+ S+G+ L E+ +P
Sbjct: 698 HTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARP 743
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,344,350
Number of Sequences: 37544
Number of extensions: 453632
Number of successful extensions: 1649
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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