Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L03
(464 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 287 6e-79
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 176 1e-45
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 168 4e-43
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 84 1e-17
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 79 2e-16
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 46 2e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 44 9e-06
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 44 2e-05
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 40 2e-04
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 31 0.065
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.11
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 26 3.3
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 3.3
SPCC24B10.21 |tpi1|tpi|triosephosphate isomerase|Schizosaccharom... 26 3.3
SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr... 25 5.7
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 25 5.7
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 7.5
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 25 7.5
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 25 7.5
SPAC23H4.13c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 7.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 24 9.9
SPBC18E5.09c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 24 9.9
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 24 9.9
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 287 bits (704), Expect = 6e-79
Identities = 138/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYL
Sbjct: 130 PAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYL 189
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
MKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQE+ TAA SSSLEKSYELPDGQVIT
Sbjct: 190 MKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVIT 249
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
IGNERFR PEALFQPS LG+E GIHE TYNSI
Sbjct: 250 IGNERFRAPEALFQPSALGLENAGIHEATYNSI 282
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 176 bits (429), Expect = 1e-45
Identities = 79/151 (52%), Positives = 111/151 (73%)
Frame = +2
Query: 11 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 190
+YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+AGRD T YL+
Sbjct: 132 VYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLIS 191
Query: 191 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIG 370
+L +GY+F TA+ E VR++KEKLCYV+ D E + + ++ L ++Y LPDG+VI +G
Sbjct: 192 LLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVG 251
Query: 371 NERFRCPEALFQPSFLGMEANGIHETTYNSI 463
+ER+ CPE LFQP +G E G+ E +++I
Sbjct: 252 SERYECPECLFQPHLVGSEQPGLSEFIFDTI 282
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 168 bits (408), Expect = 4e-43
Identities = 76/153 (49%), Positives = 107/153 (69%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL
Sbjct: 135 PALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYL 194
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
L + G+ ++AE+EIVR+IKEK CYVA DF E+ + +Y+LPD Q IT
Sbjct: 195 QLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTIT 254
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
+G E F PE LF P +G EA+G+H + SI
Sbjct: 255 LGTECFSAPEVLFNPEMMGSEASGLHIQLFKSI 287
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 83.8 bits (198), Expect = 1e-17
Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 14/147 (9%)
Frame = +2
Query: 11 MYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 166
+Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + +I + LAGR
Sbjct: 155 LYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGR 214
Query: 167 DLTDYLMKILTERGY--SFTTTAEREIVRDIKEKLCYVALDFEQEMA--TAASSSSLEKS 334
D+T ++ +L +R S TAER IKE+ CYV D +E + L+ +
Sbjct: 215 DVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFSRFDREPDRYLKYA 269
Query: 335 YELPDGQ--VITIGNERFRCPEALFQP 409
E G I +G ERF PE F P
Sbjct: 270 SESITGHSTTIDVGFERFLAPEIFFNP 296
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 79.4 bits (187), Expect = 2e-16
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 20/152 (13%)
Frame = +2
Query: 68 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 247
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 248 DIKEKLCYVALDFEQEMATAASS--SSLEKSYELPD------------------GQVITI 367
+IKE +CYV+ +F+++M S LE Y LPD QV+ +
Sbjct: 217 EIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIEQQVLNL 276
Query: 368 GNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
NERF PE LF PS + + GI E S+
Sbjct: 277 SNERFMIPELLFSPSDIEIREAGIPEAVMQSV 308
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 46.4 bits (105), Expect = 2e-06
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 178
P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+ G +
Sbjct: 145 PSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSS 204
Query: 179 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 331
YL+K+ + SF + C+V+ D+ ++A A LE+
Sbjct: 205 YLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIAHALDRDILER 255
Score = 28.3 bits (60), Expect = 0.61
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 374 ERFRCPEALFQPSFLGMEANGIHE 445
E+ R PE +F PS +G++ GI E
Sbjct: 594 EQIRVPEVIFSPSIVGIDQAGILE 617
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 44.4 bits (100), Expect = 9e-06
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Frame = +2
Query: 212 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 391
S+ +R ++ + KE + V LD + A A+S + K +E PDG G ERFR
Sbjct: 243 SYEIFQKRRVIEEWKESVLDV-LDTPFDEAKASSRNP--KPFEFPDGVTHKFGQERFRIS 299
Query: 392 EALFQPSFLGMEAN---------GIHETTYNSI 463
E LF PSF + G+HE Y SI
Sbjct: 300 EILFNPSFSASRSAETTPPQGSVGLHELVYQSI 332
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 43.6 bits (98), Expect = 2e-05
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +T +L
Sbjct: 176 PGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYMTQHL 235
Query: 185 MKILTERGYSFTTTAEREIVRDIKE 259
+L E + ++ + DI E
Sbjct: 236 QNLLRESLPTLKSSGQYVSKEDITE 260
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 39.5 bits (88), Expect = 2e-04
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G + D L
Sbjct: 128 PATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDIL 187
Query: 185 MKILTERGY 211
+ L ++ +
Sbjct: 188 AQTLRDKNF 196
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 31.5 bits (68), Expect = 0.065
Identities = 13/64 (20%), Positives = 34/64 (53%)
Frame = +2
Query: 26 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 205
+++ + + +G + V+D G + + EG +P++ ++++ G D+T MK+L
Sbjct: 280 ESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRS 339
Query: 206 GYSF 217
+ +
Sbjct: 340 HFPY 343
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 30.7 bits (66), Expect = 0.11
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = +3
Query: 204 VVTRSPPPPSVKSFATSRRNSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGS 383
+ + S P S S ++S +S++ +S+ ++S + KSS S + S
Sbjct: 147 ITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSS 206
Query: 384 VAQRLSSSPRSWVWKLTASTKRHTTPS 464
+ SS +S ++S TTP+
Sbjct: 207 KSSASPSSSKSSSKFSSSSFITSTTPA 233
Score = 25.0 bits (52), Expect = 5.7
Identities = 19/91 (20%), Positives = 34/91 (37%)
Frame = +3
Query: 192 FSQNVVTRSPPPPSVKSFATSRRNSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSE 371
+S + + S P + + +S + ST +S + KSS S
Sbjct: 123 YSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSS 182
Query: 372 TKGSVAQRLSSSPRSWVWKLTASTKRHTTPS 464
+ S + SSS ++S+K +PS
Sbjct: 183 SSSSKSSSSSSSSSKSSSSSSSSSKSSASPS 213
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 3.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 51 PVVPPVSCWIPAMVYPTQYPSTRVTPY 131
P+ WIP MVYP + T+ TP+
Sbjct: 513 PIYSKSDGWIPVMVYP--FIDTKQTPF 537
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.8 bits (54), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 204 VVTRSPPPPSVKSFATSRRNSATLR 278
V R PPPP ++ + R+N+ T R
Sbjct: 538 VAHRDPPPPPTETSSLRRKNTLTRR 562
>SPCC24B10.21 |tpi1|tpi|triosephosphate
isomerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 3.3
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = -2
Query: 274 NVAEFLLDVANDFTLGGGGERVTTFCENLHQVVCEVATG*VQTQDGVR*GVTLVDGYCVG 95
N A+ L+D +TL G ER T F E+ + V + +T+ + G+T+V C+G
Sbjct: 78 NSAQSLIDAGITYTLTGHSERRTIFKES-DEFVAD------KTKFALEQGLTVV--ACIG 128
Query: 94 YTIA 83
T+A
Sbjct: 129 ETLA 132
>SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 652
Score = 25.0 bits (52), Expect = 5.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 100 HSTHLRGLRPTARHPAFGLSR 162
H+ H+R P P+FGL R
Sbjct: 486 HTEHIRTYTPNVIEPSFGLGR 506
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.0 bits (52), Expect = 5.7
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 219 PPPPSVKSFATSR 257
PPPP VKS AT++
Sbjct: 392 PPPPRVKSLATNK 404
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 24.6 bits (51), Expect = 7.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 210 TRSPPPPSVKSFATSRR 260
T SPPPP + S +T+ R
Sbjct: 416 TESPPPPPISSSSTTPR 432
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 24.6 bits (51), Expect = 7.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -3
Query: 456 LYVVSWMPLASIPKNEGW 403
++ V+W PL S+P + W
Sbjct: 144 IHSVAWSPLVSLPSSSPW 161
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 24.6 bits (51), Expect = 7.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 80 SGDGVSHTVPIYEGYALP 133
+G G+ H + + +GYA+P
Sbjct: 157 AGRGIGHQIMVEQGYAMP 174
>SPAC23H4.13c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 24.6 bits (51), Expect = 7.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 251 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQV 358
IKEKL VA EQE + SSL+ S + G V
Sbjct: 111 IKEKLRRVANITEQEQQCIPAESSLDLSIQAMKGVV 146
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 9.9
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 4/126 (3%)
Frame = +3
Query: 99 TQYPSTRVTPYRTP----SCVWT*PVATSQTT**RFSQNVVTRSPPPPSVKSFATSRRNS 266
T PST +T S + P +T + S ++VT PP S SF+T S
Sbjct: 147 TSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFSTITNTS 206
Query: 267 ATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSVAQRLSSSPRSWVWKLTASTK 446
S+ +S V SS S + SV + S +++S+
Sbjct: 207 MIPSSSSFTTTTGSPYYNTSSFLPSS--VISSASLSSSSVLPTSIITSTSTPVTVSSSSL 264
Query: 447 RHTTPS 464
TPS
Sbjct: 265 SSFTPS 270
>SPBC18E5.09c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 128
Score = 24.2 bits (50), Expect = 9.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 266 CYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE-RFRCP 391
CYV+ +E + + SL SY +PD + I + R+ P
Sbjct: 39 CYVSRPLTKERSCSHPYISLGSSYGIPDAENIEYPRDARYHSP 81
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 24.2 bits (50), Expect = 9.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 51 PVVPPVSCWIPAMVYPTQYPSTRVTPYRTPS 143
PV PV + P M P+Q+ S +P TP+
Sbjct: 599 PVGYPVPGYTPYMRNPSQHTSVAPSPNGTPT 629
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,981,941
Number of Sequences: 5004
Number of extensions: 37233
Number of successful extensions: 149
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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