Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L03
(464 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 308 1e-84
SB_56| Best HMM Match : Actin (HMM E-Value=0) 308 2e-84
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 307 3e-84
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 307 3e-84
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 305 1e-83
SB_54| Best HMM Match : Actin (HMM E-Value=0) 218 2e-57
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 203 5e-53
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 192 1e-49
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 7e-47
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 124 3e-29
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 112 1e-25
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 92 2e-19
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 5e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 55 3e-08
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.15
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.20
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 31 0.47
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 31 0.47
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 30 1.1
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 30 1.1
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 30 1.1
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.1
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 2.5
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 2.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 2.5
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 29 2.5
SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43) 28 3.3
SB_56732| Best HMM Match : rve (HMM E-Value=0.0016) 28 3.3
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 3.3
SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 3.3
SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25) 28 3.3
SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 28 3.3
SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23) 28 3.3
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_39511| Best HMM Match : rve (HMM E-Value=0.0016) 28 3.3
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26) 28 3.3
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 28 4.4
SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11) 28 4.4
SB_15750| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5) 27 7.7
SB_33448| Best HMM Match : MTS (HMM E-Value=0.00023) 27 7.7
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 27 7.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 308 bits (757), Expect = 1e-84
Identities = 147/154 (95%), Positives = 152/154 (98%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 130 SPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVI 249
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 250 TIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 283
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 308 bits (756), Expect = 2e-84
Identities = 147/154 (95%), Positives = 152/154 (98%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 129 SPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVI
Sbjct: 189 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVI 248
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 249 TIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 282
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 307 bits (754), Expect = 3e-84
Identities = 146/154 (94%), Positives = 152/154 (98%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDY
Sbjct: 92 SPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDY 151
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVI
Sbjct: 152 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVI 211
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 212 TIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 245
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 307 bits (754), Expect = 3e-84
Identities = 146/154 (94%), Positives = 152/154 (98%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDY
Sbjct: 130 SPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDY 189
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVI 249
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 250 TIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 283
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 305 bits (749), Expect = 1e-83
Identities = 146/154 (94%), Positives = 152/154 (98%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 129 SPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDGQVI
Sbjct: 189 LMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVI 248
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 249 TIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 282
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 218 bits (533), Expect = 2e-57
Identities = 98/153 (64%), Positives = 122/153 (79%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL
Sbjct: 2175 PCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYL 2234
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
+++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I
Sbjct: 2235 QRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIR 2294
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
IG+ERFR E LFQPS LG + +GIHE+ + SI
Sbjct: 2295 IGSERFRAAEPLFQPSLLGRDIDGIHESIFKSI 2327
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 203 bits (496), Expect = 5e-53
Identities = 111/154 (72%), Positives = 118/154 (76%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 130 SPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV------------- 164
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDGQVI
Sbjct: 165 --PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVI 222
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIGNERFRCPEAL QPSFLGME++GIHETTYNSI
Sbjct: 223 TIGNERFRCPEALLQPSFLGMESSGIHETTYNSI 256
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 192 bits (468), Expect = 1e-49
Identities = 90/99 (90%), Positives = 96/99 (96%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 8 SPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDY 67
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 298
LMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 68 LMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 183 bits (445), Expect = 7e-47
Identities = 82/151 (54%), Positives = 110/151 (72%)
Frame = +2
Query: 11 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 190
+Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K
Sbjct: 136 VYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIK 195
Query: 191 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIG 370
++ RGY+F TA+ E VR +KEKLCYV + EQE A ++ L + Y LPDG+V+ +
Sbjct: 196 LMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLS 255
Query: 371 NERFRCPEALFQPSFLGMEANGIHETTYNSI 463
ERF PEALFQP + +E G+ E +N+I
Sbjct: 256 GERFEAPEALFQPHLINVEGVGVAELLFNTI 286
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 124 bits (300), Expect = 3e-29
Identities = 61/121 (50%), Positives = 87/121 (71%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL
Sbjct: 156 PALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYL 215
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
+L + G+ F +++E EIVR IKE+ S S + Y LPDG +I
Sbjct: 216 RLLLRKEGHCFHSSSELEIVRTIKEE----------------SMESERQQYALPDGSIIE 259
Query: 365 I 367
+
Sbjct: 260 V 260
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 112 bits (270), Expect = 1e-25
Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 1/137 (0%)
Frame = +2
Query: 26 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 202
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 203 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 382
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 383 RCPEALFQPSFLGMEAN 433
E LF+P L ++AN
Sbjct: 887 SSMEPLFRPDLL-LQAN 902
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +2
Query: 308 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN I
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCI 56
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.9 bits (166), Expect = 5e-13
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Frame = +2
Query: 20 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 175
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 176 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 301
++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 185 MKILTE 202
++ E
Sbjct: 123 RQMFEE 128
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 170 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 349
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 350 GQVITIGNERFRCP 391
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 62 TGIVLDSGDGVSHTVPI 112
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.9 bits (69), Expect = 0.27
Identities = 35/146 (23%), Positives = 51/146 (34%), Gaps = 3/146 (2%)
Frame = +3
Query: 36 SHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRT---PSCVWT*PVATSQTT**RFSQNV 206
+H T P PVS P P Q P R P T P V +Q +
Sbjct: 1455 THMTTPTKTPVSSPTPVPTKPQQEPEKRDLPLPTGGLPPTVRPDERKLTQNPAPSAPEG- 1513
Query: 207 VTRSPPPPSVKSFATSRRNSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSV 386
SP PS +S ++ N L TN+P ++ + S ++ +
Sbjct: 1514 KPGSPGQPSRQSASSETTNEKLLPGKQSPGASSDTELKGTPSVTNTPQLQGTSSASESTQ 1573
Query: 387 AQRLSSSPRSWVWKLTASTKRHTTPS 464
Q+ S + +S TA TT S
Sbjct: 1574 TQQSSQTTQSTTPTATALAVDSTTTS 1599
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 389 PEALFQPSFLGMEANGIHET 448
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK--LTASTKRHTTP 461
S+QSE K SV +R + + ++W+W+ T+R+ P
Sbjct: 226 STQSELKASVVERFNRTLKTWMWRWFTHKETRRYVLP 262
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 31.1 bits (67), Expect = 0.47
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SETK SV +R + + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SETK SV +R + + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 252 SRRNSATLRS-TXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSVAQRLSSSPRSWVWK 428
+RR+S T RS T T S T +SS T S+ +R S++ RS +
Sbjct: 688 TRRSSNTTRSLTRRSSNTTRGHTRRSSNTTRSHTRRSSN--TTRSLTRRSSNTTRSHTRR 745
Query: 429 LTASTKRHTTPS 464
+ +T+RHT S
Sbjct: 746 SSNTTRRHTRRS 757
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SETK SV +R + + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S+QSE K SV +R + + ++W+W+
Sbjct: 59 STQSELKASVVERFNRTLKTWMWR 82
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SETK SV +R + + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +2
Query: 68 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 247
+V+D+G +H VP++ G + A+ R + +L E +F ++
Sbjct: 359 LVVDTGYSFTHIVPVFNGKVIKKAVRRQ-----------LHVLDE---TF-------VIN 397
Query: 248 DIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 349
+KE CYV+ F ++M A +++ + Y LPD
Sbjct: 398 QVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWR 216
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 28.7 bits (61), Expect = 2.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S+++ETK SV +R + + + W+W+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWR 123
>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1847
Score = 28.7 bits (61), Expect = 2.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S+++ETK SV +R + + + W+W+
Sbjct: 902 STKNETKASVVERFNRTFKGWMWR 925
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 254 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 394
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWKLTASTKRH 452
S++SE K SV +R + + ++W+W+ + H
Sbjct: 724 STRSELKASVVERFNRTLKTWMWRWFTYKETH 755
>SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43)
Length = 1803
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 628 STRSELKASVVERFNRTLKTWMWR 651
>SB_56732| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 236
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 54 STRSELKASVVERFNRTLKTWMWR 77
>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 232 STRSELKASVVERFNRTLKTWMWR 255
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 1475 STRSELKASVVERFNRTLKTWMWR 1498
>SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 91 STRSELKASVVERFNRTLKTWMWR 114
>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1725
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 485 STRSELKASVVERFNRTLKTWMWR 508
>SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 346
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 285 STRSELKASVVERFNRTLKTWMWR 308
>SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 182 STRSELKASVVERFNRTLKTWMWR 205
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 430 STRSELKASVVERFNRTLKTWMWR 453
>SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 171 STRSELKASVVERFNRTLKTWMWR 194
>SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23)
Length = 346
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 206 STRSELKASVVERFNRTLKTWMWR 229
>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1761
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 176 STRSELKASVVERFNRTLKTWMWR 199
>SB_39511| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 850
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 54 STRSELKASVVERFNRTLKTWMWR 77
>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
Length = 1058
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 238 STRSELKASVVERFNRTLKTWMWR 261
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 45 TRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQT 179
TR + P+ +P + QYP +PY T + + T P+ T ++
Sbjct: 223 TRMLTVPLITPVPLFLLLHQYPYANCSPYHTSTRMLTVPLITPES 267
>SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11)
Length = 357
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 357 SSQSETKGSVAQRLSSSPRSWVWK 428
S++SE K SV +R + + ++W+W+
Sbjct: 212 STRSEFKASVVERFNRTLKTWMWR 235
>SB_15750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 303 VAISCSKSSAT*QSFSLMSRTISRSAVVVNE 211
V I+ +SS T ++FSL +T +RSAV N+
Sbjct: 129 VTINLKRSSTTFEAFSLELQTTNRSAVQGND 159
>SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5)
Length = 370
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 170 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS-SSSLEKSYELP 346
++D L+K + Y+ T ER++ ++C+ ++E ++ +S S+S ++
Sbjct: 128 ISDSLLKEEIDLSYALTLFDERDLKAHGNSEVCFQEAGSDRENSSPSSHSNSASENNNSA 187
Query: 347 DGQVITIGNERFRCPEALFQ 406
Q+ + + +C ++LFQ
Sbjct: 188 SSQINALDHNIRKC-DSLFQ 206
>SB_33448| Best HMM Match : MTS (HMM E-Value=0.00023)
Length = 165
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 442 VDAVSFHTQERGLEESLWATEPFVSDCDDL 353
VD V+ + + G+E S+ A + V DCDDL
Sbjct: 27 VDDVAENARLHGVETSVTAIQADVFDCDDL 56
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +3
Query: 90 VYPTQYPSTRVTPYRTPSCVWT*PVATSQT 179
V+P++ ++++ + TP +W+ P +TS+T
Sbjct: 784 VWPSKSRTSKLNQHTTPRAMWSSPSSTSRT 813
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,849,412
Number of Sequences: 59808
Number of extensions: 324670
Number of successful extensions: 1258
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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