Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L03
(464 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 294 2e-80
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 289 6e-79
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 289 6e-79
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 287 2e-78
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 287 3e-78
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 287 3e-78
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 287 3e-78
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 287 3e-78
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 286 6e-78
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 270 2e-73
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 240 3e-64
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 239 7e-64
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 169 1e-42
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 90 6e-19
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 84 4e-17
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 84 4e-17
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 4e-16
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 77 4e-15
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 77 6e-15
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 1e-05
At2g40070.1 68415.m04923 expressed protein 31 0.38
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 31 0.38
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 1.2
At4g28230.1 68417.m04045 expressed protein 29 2.0
At5g52510.1 68418.m06514 scarecrow-like transcription factor 8 (... 28 2.7
At5g43500.2 68418.m05318 expressed protein 28 2.7
At5g43500.1 68418.m05319 expressed protein 28 2.7
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 28 2.7
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 28 3.6
At4g18050.1 68417.m02686 ABC transporter family protein contains... 27 4.7
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 4.7
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 27 4.7
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 6.2
At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR... 27 6.2
At4g29450.1 68417.m04204 leucine-rich repeat protein kinase, put... 27 8.3
At3g55320.1 68416.m06144 ABC transporter family protein similar ... 27 8.3
At3g21510.1 68416.m02714 two-component phosphorelay mediator 3 (... 27 8.3
At2g18770.1 68415.m02185 expressed protein 27 8.3
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 8.3
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 8.3
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 23 8.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 294 bits (721), Expect = 2e-80
Identities = 140/154 (90%), Positives = 147/154 (95%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 131 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 190
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+EQEM TA +SSS+EKSYELPDGQVI
Sbjct: 191 LMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVI 250
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIG ERFRCPE LFQPS +GMEA GIHETTYNSI
Sbjct: 251 TIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSI 284
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 289 bits (709), Expect = 6e-79
Identities = 137/153 (89%), Positives = 146/153 (95%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
MKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVIT
Sbjct: 192 MKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVIT 251
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
IG+ERFRCPE L+QPS +GME GIHETTYNSI
Sbjct: 252 IGSERFRCPEVLYQPSMIGMENAGIHETTYNSI 284
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 289 bits (709), Expect = 6e-79
Identities = 137/153 (89%), Positives = 146/153 (95%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
MKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVIT
Sbjct: 192 MKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVIT 251
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
IG+ERFRCPE L+QPS +GME GIHETTYNSI
Sbjct: 252 IGSERFRCPEVLYQPSMIGMENAGIHETTYNSI 284
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 287 bits (705), Expect = 2e-78
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSL 191
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
MKILTERGY FTTTAEREIVRDIKEKL YVALD+EQE+ TA SSSS+EK+YELPDGQVIT
Sbjct: 192 MKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVIT 251
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
IG ERFRCPE LFQPS +GMEA GIHETTYNSI
Sbjct: 252 IGAERFRCPEVLFQPSLIGMEAPGIHETTYNSI 284
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 287 bits (704), Expect = 3e-78
Identities = 137/154 (88%), Positives = 146/154 (94%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+
Sbjct: 131 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDH 190
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDFEQE+ T+ +SSS+EKS+ELPDGQVI
Sbjct: 191 LMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVI 250
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIG ERFRCPE LFQPS +GME GIHETTYNSI
Sbjct: 251 TIGAERFRCPEVLFQPSMIGMENPGIHETTYNSI 284
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 287 bits (703), Expect = 3e-78
Identities = 136/154 (88%), Positives = 147/154 (95%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDY
Sbjct: 131 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVI
Sbjct: 191 LMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVI 250
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIG ERFRCPE LFQPSF+GMEA GIHETTYNSI
Sbjct: 251 TIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSI 284
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 287 bits (703), Expect = 3e-78
Identities = 136/154 (88%), Positives = 147/154 (95%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDY
Sbjct: 131 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVI
Sbjct: 191 LMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVI 250
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIG ERFRCPE LFQPSF+GMEA GIHETTYNSI
Sbjct: 251 TIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSI 284
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 287 bits (703), Expect = 3e-78
Identities = 136/154 (88%), Positives = 147/154 (95%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDY
Sbjct: 131 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVI
Sbjct: 191 LMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVI 250
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIG ERFRCPE LFQPSF+GMEA GIHETTYNSI
Sbjct: 251 TIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSI 284
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 286 bits (701), Expect = 6e-78
Identities = 136/154 (88%), Positives = 146/154 (94%)
Frame = +2
Query: 2 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 181
TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+
Sbjct: 131 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDH 190
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ T+ +SSS+EKS+ELPDGQVI
Sbjct: 191 LMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVI 250
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
TIG ERFRCPE LFQPS +GME GIHETTYNSI
Sbjct: 251 TIGAERFRCPEVLFQPSMIGMENPGIHETTYNSI 284
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 270 bits (663), Expect = 2e-73
Identities = 123/153 (80%), Positives = 142/153 (92%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL
Sbjct: 133 PSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYL 192
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
KI+ ERGY++TT+AEREIVRDIKEKLCY+A+D+EQEM A +SS+++++YELPDGQVIT
Sbjct: 193 TKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVIT 252
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
IG ERFRCPE LFQ S +GME +GIHETTYNSI
Sbjct: 253 IGAERFRCPEVLFQTSLIGMETSGIHETTYNSI 285
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 240 bits (588), Expect = 3e-64
Identities = 110/153 (71%), Positives = 131/153 (85%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL
Sbjct: 121 PAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYL 180
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQEM +++K+Y LPDGQ IT
Sbjct: 181 IEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEIT 240
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
I ERF CPE LFQPS +G E++GIHE T NSI
Sbjct: 241 IEAERFMCPEVLFQPSVIGKESSGIHEATRNSI 273
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 239 bits (585), Expect = 7e-64
Identities = 113/153 (73%), Positives = 132/153 (86%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YL
Sbjct: 87 PSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYL 146
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 364
MKI+ ERGY T+AERE+VRDIKE+ Y+ALD+EQEM A SS+++++YELPDGQVIT
Sbjct: 147 MKIMMERGY---TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVIT 203
Query: 365 IGNERFRCPEALFQPSFLGMEANGIHETTYNSI 463
IG ERFRCPE LFQPS +GME +GIHE TYNSI
Sbjct: 204 IGAERFRCPEVLFQPSLIGMETSGIHEKTYNSI 236
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 169 bits (410), Expect = 1e-42
Identities = 72/151 (47%), Positives = 109/151 (72%)
Frame = +2
Query: 11 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 190
+++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+
Sbjct: 133 VFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVD 192
Query: 191 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIG 370
+L+ RGY+ TA+ E VR+IKEKLCY++ D+++E ++ L K+Y LPDG+VI +G
Sbjct: 193 LLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVG 252
Query: 371 NERFRCPEALFQPSFLGMEANGIHETTYNSI 463
ERF+ PEALF P + +E +G+ + + I
Sbjct: 253 TERFQAPEALFTPELIDVEGDGMADMVFRCI 283
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 90.2 bits (214), Expect = 6e-19
Identities = 57/144 (39%), Positives = 77/144 (53%)
Frame = +2
Query: 14 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT +
Sbjct: 121 YASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKLFAQE 180
Query: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 373
L + S + V +KE+ A E E+A + + + + LPDGQVI+IG
Sbjct: 181 LGKTNPSMNLSMSD--VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGR 235
Query: 374 ERFRCPEALFQPSFLGMEANGIHE 445
ER+ EALFQPS LG+E +GI E
Sbjct: 236 ERYSVGEALFQPSILGLEEHGIVE 259
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 84.2 bits (199), Expect = 4e-17
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDY 181
PA+ QAVL+LYA+ RT+GIV++ G V +PI G + + + LT +
Sbjct: 232 PAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGF 291
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
L + + E SF + VR +KEKLCYVALD++ E+ S + S E+
Sbjct: 292 LKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWF 343
Query: 362 TIGNERFRCPEALFQPSFLGMEANGIHE 445
T+ ERF+ E LFQP GM A +H+
Sbjct: 344 TLSKERFQTGEILFQPRLAGMRAMSLHQ 371
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 84.2 bits (199), Expect = 4e-17
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 169
P +Y+A+ +VL+L A T TG+V+D GDG +H VP+ EGY + I + +AG+D
Sbjct: 149 PGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKD 208
Query: 170 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD----FEQEMATAASSSSLEKSY 337
+T ++ +++ ERG + ++ R +KE CY D F + A K
Sbjct: 209 VTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGV 268
Query: 338 ELPDGQVIT--IGNERFRCPEALFQP 409
+ G T +G ERF PE F P
Sbjct: 269 KPKTGAPYTCDVGYERFLGPEVFFNP 294
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 81.0 bits (191), Expect = 4e-16
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 30/168 (17%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 184
PA+++A VL+ +A+GR T +V+D G G + P+++GY L A++ L G LTD L
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCL 213
Query: 185 MKILTERG------YSF-------------------TTTA-----EREIVRDIKEKLCYV 274
+K L +G YSF TT + +R IV DIK+ +C V
Sbjct: 214 LKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRV 273
Query: 275 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 418
+ + S+ SYELPDGQ + IG +RF+ P+ +F PS +
Sbjct: 274 P---DTPYDDKSYSNIPTTSYELPDGQTLEIGADRFKVPDVMFNPSIV 318
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 77.4 bits (182), Expect = 4e-15
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = +2
Query: 68 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 247
+V+D G +H VP+ + L HAI R+DL G+ T+YL ++++ R S E +V
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVD 212
Query: 248 DIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDGQVITIG 370
D KEKLC+V+LD +++ A + ++L KS Y LPDG T G
Sbjct: 213 DAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
Score = 36.3 bits (80), Expect = 0.010
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +2
Query: 224 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 403
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 404 QPSFLGMEANGIHETTYNSI 463
QP+ LGM G+ E +I
Sbjct: 308 QPADLGMNQAGLAECIVRAI 327
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 77.0 bits (181), Expect = 6e-15
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = +2
Query: 5 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDY 181
PA+ QAVL+LYA+ RT+GIV++ G V +PI G + + + LT +
Sbjct: 232 PAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGF 291
Query: 182 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 361
L + + E SF + VR +KEKLCYVALD++ E+ S + S E+
Sbjct: 292 LKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWF 343
Query: 362 TIGNERFRCPEALFQPSFLGM 424
T+ ERF+ E LFQP G+
Sbjct: 344 TLSKERFQTGEILFQPRLAGI 364
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 46.0 bits (104), Expect = 1e-05
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +2
Query: 5 PAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 169
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 146 PAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYH 205
Query: 170 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 298
+TDYL ++L+ + ++ E D+K + CY+A D+ E+
Sbjct: 206 VTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYASEI 248
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 230 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP---DGQVITIGNERFRCPEAL 400
E E+ R + +L + F Q++ S +S E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 401 FQPSFLGMEANGIHETTYNSI 463
F P+ +G++ G+ E SI
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSI 623
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 31.1 bits (67), Expect = 0.38
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 9 PCT*LSRPC-SHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQTT* 185
P T SR S TRP + + A PT P +R T + P A+ TT
Sbjct: 205 PSTPTSRATVSSATRPSLTNSRSTVSATTKPT--PMSRSTSLSSSRLT---PTASKPTTS 259
Query: 186 *RFSQNVVTRSPPPPSVKSFATSRRNSATLRST 284
S VTRS P + KS SR + RST
Sbjct: 260 TARSAGSVTRSTPSTTTKSAGPSRSTTPLSRST 292
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 31.1 bits (67), Expect = 0.38
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = +3
Query: 33 CSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVT 212
C T PVS P + PT PS+ +P TPS P + R S V+
Sbjct: 121 CDVSTPAASTPVS---PPVESPTTSPSSAKSPAITPSS----PAVSHSPPPVRHSSPPVS 173
Query: 213 RSPPPPSVKSFATSRRNSATLRST 284
S PP S S TSR + A S+
Sbjct: 174 HSSPPVSHSSPPTSRSSPAVSHSS 197
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.5 bits (63), Expect = 1.2
Identities = 26/77 (33%), Positives = 31/77 (40%)
Frame = +3
Query: 3 HPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQTT 182
+PP T P S PV P + P P YP +P PS ++ PV S
Sbjct: 575 YPPVTNSPPPPS----PVYYPPVTYSPPPPSPVYYPQVTPSP-PPPSPLYYPPVTPSPPP 629
Query: 183 **RFSQNVVTRSPPPPS 233
VT SPPPPS
Sbjct: 630 PSPVYYPPVTPSPPPPS 646
Score = 28.7 bits (61), Expect = 2.0
Identities = 27/77 (35%), Positives = 30/77 (38%)
Frame = +3
Query: 3 HPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQTT 182
+PP T P S P V P P P YP +P PS V+ PV S
Sbjct: 590 YPPVTYSPPPPSPVYYPQVTPS----PPPPSPLYYPPVTPSP-PPPSPVYYPPVTPSPPP 644
Query: 183 **RFSQNVVTRSPPPPS 233
VT SPPPPS
Sbjct: 645 PSPVYYPPVTPSPPPPS 661
Score = 28.3 bits (60), Expect = 2.7
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +3
Query: 30 PCSHCTRPVVPPVSCWIPAMVYP-----TQYPSTRVTPYRTPSCVWT*PVATSQTT**RF 194
PC + P PPV + P P YP +P PS V+ PV S
Sbjct: 532 PCPESSPP--PPVVYYAPVTQSPPPPSPVYYPPVTQSP-PPPSPVYYPPVTNSPPPPSPV 588
Query: 195 SQNVVTRSPPPPS 233
VT SPPPPS
Sbjct: 589 YYPPVTYSPPPPS 601
Score = 27.1 bits (57), Expect = 6.2
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = +3
Query: 51 PVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPP 230
PV P P P YP +P PS V+ PV S VT SPPPP
Sbjct: 557 PVYYPPVTQSPPPPSPVYYPPVTNSP-PPPSPVYYPPVTYSPPPPSPVYYPQVTPSPPPP 615
Query: 231 S 233
S
Sbjct: 616 S 616
>At4g28230.1 68417.m04045 expressed protein
Length = 402
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 345 PTVKSSQSETKGSVAQRLSSSPRSWVWKLTASTKRHTT 458
P ++ Q T+G LS SPRS K+TA+ K+ T
Sbjct: 202 PGIEEGQVTTRGKGRTSLSLSPRSRKAKMTAAQKQAAT 239
>At5g52510.1 68418.m06514 scarecrow-like transcription factor 8
(SCL8)
Length = 640
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +3
Query: 198 QNVVTRSPPPPSVKSFATSRRNSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETK 377
QN+VT +P P V SF+ S +S++ ST T + ++E
Sbjct: 228 QNLVTPNPNPNPVLSFSPSSSSSSSSPSTASTTTSVCSRQTVMEIAT---AIAEGKTEIA 284
Query: 378 GSVAQRLSSSP 410
+ R+S +P
Sbjct: 285 TEILARVSQTP 295
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 26 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
+ + +++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 273 EGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 26 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
+ + +++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 285 EGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.3 bits (60), Expect = 2.7
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Frame = +3
Query: 6 PPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVW----T*PVATS 173
PP T P T PVV P + P + PT P P TP + T PV T
Sbjct: 158 PPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVITP 217
Query: 174 QTT**RFSQNVVTRSPPPPSV 236
T + VVT P P V
Sbjct: 218 PTP----TPPVVTPPTPTPPV 234
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 27.9 bits (59), Expect = 3.6
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +2
Query: 44 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 223
+ SG+T +V SG G S V + E + P++ ++ L G ++ +K L E+
Sbjct: 390 FPSGKTVAVVGGSGSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVN 447
Query: 224 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY--ELPDGQVITIG 370
I E + Y D AA+S++ S+ LP G +G
Sbjct: 448 QEPALFATTILENILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVG 498
>At4g18050.1 68417.m02686 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1281
Score = 27.5 bits (58), Expect = 4.7
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 17 VAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
V I A SL+ +G+T +V SG G S + + E + P + L + DL +K
Sbjct: 370 VQIFAGFSLFVPNGKTVALVGQSGSGKSTVISLIERFYDPESGQVL-IDNIDLKKLQLKW 428
Query: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALD-FEQEMATAASSSSLEKSYE-LPDGQVITI 367
+ + + IKE + Y D +QE+ TA ++ K + LP G +
Sbjct: 429 IRSK-IGLVSQEPVLFATTIKENIAYGKEDATDQEIRTAIELANAAKFIDKLPQGLDTMV 487
Query: 368 G 370
G
Sbjct: 488 G 488
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.5 bits (58), Expect = 4.7
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +2
Query: 53 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 232
G+T +V SG G S + + E Y P A L L GRDL Y ++ L R + E
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL--RSHMGLIQQE 1242
Query: 233 REIV-RDIKEKLCYVALD-FEQEMATAASSSSLEKSY-ELPDGQVITIG 370
I I+E + Y + E EM AA ++ LP G IG
Sbjct: 1243 PIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIG 1291
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 27.5 bits (58), Expect = 4.7
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 50 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 229
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 230 EREIVRDIKEKLCYVALDFEQ-EMATAASSSSLEK-SYELPDGQVITIG 370
IKE + D +Q E+ AA ++ +LPDG +G
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVG 501
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 167 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 271
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR1
protein, putative strong similarity to SP|O22315
Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis
thaliana}; cDNA NCBI_gi:15810292 supports a truncated
version while protein evidence supports a longer model.
Length = 278
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 216 SPPPPSVKSFATSR-RNSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSVAQ 392
S P +S++ SR R + RS SP +S+S S ++
Sbjct: 199 SRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSPKAKSLRRSPAKSTSRSPRSRSRSK 258
Query: 393 RLSSSPRSWV 422
S SPR WV
Sbjct: 259 SRSLSPRGWV 268
>At4g29450.1 68417.m04204 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 863
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 185 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 346
+K+L +G +FT + +++ +K L ++ D EQ + + +KS +P
Sbjct: 463 LKVLNLKGNNFTGFIPKSLMKKLKAGLLTLSAD-EQNLCNSCQEKKKKKSMVVP 515
>At3g55320.1 68416.m06144 ABC transporter family protein similar to
multidrug resistant P-glycoprotein pmdr1 GI:4204793 from
[Solanum tuberosum]
Length = 1408
Score = 26.6 bits (56), Expect = 8.3
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +2
Query: 47 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 226
+ G+T +V SG G S + + E Y P A L L GRDL Y ++ L R +
Sbjct: 1185 SGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVL-LDGRDLKLYNLRWL--RSHMGLVQ 1241
Query: 227 AEREIV-RDIKEKLCYVALD-FEQEMATAASSSSLEKSY-ELPDGQVITIG 370
E I I+E + Y + E EM AA ++ LP G IG
Sbjct: 1242 QEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIG 1292
>At3g21510.1 68416.m02714 two-component phosphorelay mediator 3
(HP3) identical to ATHP3 [Arabidopsis thaliana]
GI:4156245
Length = 154
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 301 HRCLQQLPRE-VLRTPRRSSHHNRKRKVPLPRGSLPALVLGY 423
HRCLQQ+ +E L R + ++++ G +PA+ LG+
Sbjct: 113 HRCLQQVKQEYYLVKNRLETLFKLEQQIVASGGMIPAVELGF 154
>At2g18770.1 68415.m02185 expressed protein
Length = 260
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 253 DVANDFTLGGGGERVTTFCENLHQVVCEVATG*VQTQDGVR 131
D+ANDFTLG GE V +F ++V A+G D V+
Sbjct: 212 DIANDFTLGIEGE-VFSFSHCHNKVTVAEASGLTGETDQVQ 251
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 110 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 232
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 110 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 232
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 22.6 bits (46), Expect(2) = 8.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 PTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPP 230
P YP +P P V+ PV S + + VT+SPPPP
Sbjct: 637 PVYYPPVTASP--PPPPVYYTPVIQSPPPPPVY-YSPVTQSPPPP 678
Score = 22.2 bits (45), Expect(2) = 8.7
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 207 VTRSPPPPSV 236
VT+SPPPP V
Sbjct: 700 VTQSPPPPPV 709
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,856,872
Number of Sequences: 28952
Number of extensions: 218917
Number of successful extensions: 967
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 782033640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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