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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L02
         (569 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0593 + 19808148-19808310,19809416-19809531,19810129-198102...   107   6e-24
02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643...    42   5e-04
02_01_0716 + 5348720-5349115                                           30   1.1  
12_01_0112 - 860330-861946                                             30   1.5  
02_05_0218 + 26860319-26862448                                         30   1.5  
10_03_0010 + 7007694-7007888,7007994-7008059,7008161-7008334,700...    28   4.6  
07_01_0698 - 5269329-5269579,5270673-5270928,5271158-5271725,527...    28   6.0  
03_06_0701 - 35620559-35620777,35620872-35620949,35621038-356211...    28   6.0  
04_04_1091 - 30798420-30798584,30798870-30799045,30799127-307992...    27   8.0  
02_02_0497 + 10961079-10963824,10964182-10964282,10964759-109648...    27   8.0  

>07_03_0593 +
           19808148-19808310,19809416-19809531,19810129-19810202,
           19810286-19810335,19810498-19810592
          Length = 165

 Score =  107 bits (257), Expect = 6e-24
 Identities = 60/135 (44%), Positives = 88/135 (65%)
 Frame = +3

Query: 6   MSSTDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVG 185
           +S++ STA A  V K  V +      +GPYSQAI ++  +++SGVLG++ +         
Sbjct: 44  VSASLSTAAA-AVKKEAVQTEKAPAALGPYSQAIKANNMVFVSGVLGLNPE--------- 93

Query: 186 AQTRQVLENLKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQV 365
                V++N+  +++A G S  SV+KTTI+LA++ DF+ VN+IYA+YFP   PAR+TYQV
Sbjct: 94  -----VMKNMGEILKASGASYSSVVKTTIMLADLQDFKKVNEIYAKYFPAPAPARSTYQV 148

Query: 366 TKLPLNAAVEIEAIA 410
             LPLNA +EIE IA
Sbjct: 149 AALPLNARIEIECIA 163


>02_05_1170 + 34663853-34663928,34664038-34664078,34664317-34664386,
            34664499-34664647,34664784-34664879,34665406-34665476,
            34665637-34665698,34665778-34665841,34665950-34666034,
            34666129-34666255,34666381-34666454,34666539-34666599,
            34666683-34666771,34666897-34667206,34667763-34667815,
            34668299-34668370,34668648-34668914,34669015-34669047,
            34669163-34669245,34669522-34669594,34669834-34670170,
            34670302-34670633,34670816-34671135,34671261-34671612,
            34671691-34671906
          Length = 1170

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +3

Query: 84   VGPYSQAILSDKTLYISGVLGMDRDA-QLVSGGVGAQTRQVLENLKHVVEAGGGSLES 254
            +GPYSQA L  + LY++G LG+D    +L  GG  A+    L N + V  A G S+ S
Sbjct: 870  IGPYSQATLHGEILYMAGQLGLDPPTMKLCPGGPTAELEFALRNSEAVANAFGCSIFS 927


>02_01_0716 + 5348720-5349115
          Length = 131

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 238 PPASTTCFKFSKTWRVCAPTPPDTNCASRSMPS 140
           PP S T    S TW    PTPP  + A+ S P+
Sbjct: 39  PPRSKTATAASLTWTSMVPTPPPLSGAASSGPT 71


>12_01_0112 - 860330-861946
          Length = 538

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +3

Query: 147 MDRDAQLVSGGVGAQTRQVLENLKHVVEAGGGSLESVIKT 266
           ++RD+   SGG   ++R+   +    ++ GGG++++V KT
Sbjct: 284 VERDSAASSGGANGRSRRASLSGAGALQGGGGAMQTVAKT 323


>02_05_0218 + 26860319-26862448
          Length = 709

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = +3

Query: 177 GVGAQTRQVLENLKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPK-NCPARA 353
           GVG Q    L+ L H   AGG +L  ++K T  ++          +  +   +     R 
Sbjct: 465 GVGGQWASFLQELAHRRGAGGMAL-PLLKLTAFMSTASHHPLELHLTQDNLSQFAAELRI 523

Query: 354 TYQVTKLPLNAAVEIEAIALSGDLVITEAGPCPCA 458
            ++   + L+A    E I+ SGD V+  + P  C+
Sbjct: 524 PFEFNAVSLDAFNPAELISSSGDEVVAVSLPVGCS 558


>10_03_0010 +
           7007694-7007888,7007994-7008059,7008161-7008334,
           7009232-7009306,7009384-7009510,7012280-7012371,
           7012496-7012566,7012683-7012792,7013016-7013053,
           7013825-7013960,7014382-7014456,7014574-7014697,
           7014917-7015013,7015426-7015451,7016180-7016255,
           7016499-7016636,7016735-7016872
          Length = 585

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 153 DPCRVLPIYRESCQIKWLDCRVQPVYRHLGMLQWSS 46
           DPCR L + +ES Q  W++  +   Y+ LG     S
Sbjct: 435 DPCRFLEVIKESMQSLWIE--IVKKYQKLGFCSTKS 468


>07_01_0698 -
           5269329-5269579,5270673-5270928,5271158-5271725,
           5271757-5272763
          Length = 693

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 159 AQLVSGGVGAQTRQVLENLKHVVEAGGGS 245
           AQ V GG G + + +  N    VEAGGGS
Sbjct: 75  AQAVVGGGGEKAKDLNNNAAPRVEAGGGS 103


>03_06_0701 -
           35620559-35620777,35620872-35620949,35621038-35621191,
           35621279-35621391,35621487-35621586,35622193-35622389,
           35622470-35622526,35622630-35622734,35622824-35622931,
           35623651-35623848,35624022-35624024
          Length = 443

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -3

Query: 222 HASSFLKLGASVLPLHQIPTAHHDPCRVLPIYRESC 115
           H + +L++      +++IP+   DP + +P+ R+ C
Sbjct: 227 HNNDYLEICRCYKSIYEIPSIKEDPSKWIPVLRKIC 262


>04_04_1091 -
           30798420-30798584,30798870-30799045,30799127-30799216,
           30799673-30799742,30800598-30800697,30800922-30801001,
           30801347-30801412,30801489-30801597,30801862-30801905,
           30802171-30802242,30803198-30803311,30804342-30804398
          Length = 380

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 126 YISGVLGMDRDAQLVSGGVGAQTRQVLENLKHVV 227
           YISGV G+D      S  VG      LEN+  +V
Sbjct: 137 YISGVKGLDSSGLSSSAAVGIAYLMALENVNDLV 170


>02_02_0497 +
           10961079-10963824,10964182-10964282,10964759-10964800,
           10966918-10966986
          Length = 985

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 415 LRAIASISTAAFRGSLVTWYVARAGQFLGKY 323
           +RA+ SI  ++  G +VTW    AG  + +Y
Sbjct: 354 MRAVESIFRSSKMGDIVTWNTVIAGYVMNRY 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,851,516
Number of Sequences: 37544
Number of extensions: 347855
Number of successful extensions: 834
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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