BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_L02 (569 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0593 + 19808148-19808310,19809416-19809531,19810129-198102... 107 6e-24 02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643... 42 5e-04 02_01_0716 + 5348720-5349115 30 1.1 12_01_0112 - 860330-861946 30 1.5 02_05_0218 + 26860319-26862448 30 1.5 10_03_0010 + 7007694-7007888,7007994-7008059,7008161-7008334,700... 28 4.6 07_01_0698 - 5269329-5269579,5270673-5270928,5271158-5271725,527... 28 6.0 03_06_0701 - 35620559-35620777,35620872-35620949,35621038-356211... 28 6.0 04_04_1091 - 30798420-30798584,30798870-30799045,30799127-307992... 27 8.0 02_02_0497 + 10961079-10963824,10964182-10964282,10964759-109648... 27 8.0 >07_03_0593 + 19808148-19808310,19809416-19809531,19810129-19810202, 19810286-19810335,19810498-19810592 Length = 165 Score = 107 bits (257), Expect = 6e-24 Identities = 60/135 (44%), Positives = 88/135 (65%) Frame = +3 Query: 6 MSSTDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVG 185 +S++ STA A V K V + +GPYSQAI ++ +++SGVLG++ + Sbjct: 44 VSASLSTAAA-AVKKEAVQTEKAPAALGPYSQAIKANNMVFVSGVLGLNPE--------- 93 Query: 186 AQTRQVLENLKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQV 365 V++N+ +++A G S SV+KTTI+LA++ DF+ VN+IYA+YFP PAR+TYQV Sbjct: 94 -----VMKNMGEILKASGASYSSVVKTTIMLADLQDFKKVNEIYAKYFPAPAPARSTYQV 148 Query: 366 TKLPLNAAVEIEAIA 410 LPLNA +EIE IA Sbjct: 149 AALPLNARIEIECIA 163 >02_05_1170 + 34663853-34663928,34664038-34664078,34664317-34664386, 34664499-34664647,34664784-34664879,34665406-34665476, 34665637-34665698,34665778-34665841,34665950-34666034, 34666129-34666255,34666381-34666454,34666539-34666599, 34666683-34666771,34666897-34667206,34667763-34667815, 34668299-34668370,34668648-34668914,34669015-34669047, 34669163-34669245,34669522-34669594,34669834-34670170, 34670302-34670633,34670816-34671135,34671261-34671612, 34671691-34671906 Length = 1170 Score = 41.5 bits (93), Expect = 5e-04 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +3 Query: 84 VGPYSQAILSDKTLYISGVLGMDRDA-QLVSGGVGAQTRQVLENLKHVVEAGGGSLES 254 +GPYSQA L + LY++G LG+D +L GG A+ L N + V A G S+ S Sbjct: 870 IGPYSQATLHGEILYMAGQLGLDPPTMKLCPGGPTAELEFALRNSEAVANAFGCSIFS 927 >02_01_0716 + 5348720-5349115 Length = 131 Score = 30.3 bits (65), Expect = 1.1 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 Query: 238 PPASTTCFKFSKTWRVCAPTPPDTNCASRSMPS 140 PP S T S TW PTPP + A+ S P+ Sbjct: 39 PPRSKTATAASLTWTSMVPTPPPLSGAASSGPT 71 >12_01_0112 - 860330-861946 Length = 538 Score = 29.9 bits (64), Expect = 1.5 Identities = 12/40 (30%), Positives = 25/40 (62%) Frame = +3 Query: 147 MDRDAQLVSGGVGAQTRQVLENLKHVVEAGGGSLESVIKT 266 ++RD+ SGG ++R+ + ++ GGG++++V KT Sbjct: 284 VERDSAASSGGANGRSRRASLSGAGALQGGGGAMQTVAKT 323 >02_05_0218 + 26860319-26862448 Length = 709 Score = 29.9 bits (64), Expect = 1.5 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +3 Query: 177 GVGAQTRQVLENLKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPK-NCPARA 353 GVG Q L+ L H AGG +L ++K T ++ + + + R Sbjct: 465 GVGGQWASFLQELAHRRGAGGMAL-PLLKLTAFMSTASHHPLELHLTQDNLSQFAAELRI 523 Query: 354 TYQVTKLPLNAAVEIEAIALSGDLVITEAGPCPCA 458 ++ + L+A E I+ SGD V+ + P C+ Sbjct: 524 PFEFNAVSLDAFNPAELISSSGDEVVAVSLPVGCS 558 >10_03_0010 + 7007694-7007888,7007994-7008059,7008161-7008334, 7009232-7009306,7009384-7009510,7012280-7012371, 7012496-7012566,7012683-7012792,7013016-7013053, 7013825-7013960,7014382-7014456,7014574-7014697, 7014917-7015013,7015426-7015451,7016180-7016255, 7016499-7016636,7016735-7016872 Length = 585 Score = 28.3 bits (60), Expect = 4.6 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 Query: 153 DPCRVLPIYRESCQIKWLDCRVQPVYRHLGMLQWSS 46 DPCR L + +ES Q W++ + Y+ LG S Sbjct: 435 DPCRFLEVIKESMQSLWIE--IVKKYQKLGFCSTKS 468 >07_01_0698 - 5269329-5269579,5270673-5270928,5271158-5271725, 5271757-5272763 Length = 693 Score = 27.9 bits (59), Expect = 6.0 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 159 AQLVSGGVGAQTRQVLENLKHVVEAGGGS 245 AQ V GG G + + + N VEAGGGS Sbjct: 75 AQAVVGGGGEKAKDLNNNAAPRVEAGGGS 103 >03_06_0701 - 35620559-35620777,35620872-35620949,35621038-35621191, 35621279-35621391,35621487-35621586,35622193-35622389, 35622470-35622526,35622630-35622734,35622824-35622931, 35623651-35623848,35624022-35624024 Length = 443 Score = 27.9 bits (59), Expect = 6.0 Identities = 9/36 (25%), Positives = 21/36 (58%) Frame = -3 Query: 222 HASSFLKLGASVLPLHQIPTAHHDPCRVLPIYRESC 115 H + +L++ +++IP+ DP + +P+ R+ C Sbjct: 227 HNNDYLEICRCYKSIYEIPSIKEDPSKWIPVLRKIC 262 >04_04_1091 - 30798420-30798584,30798870-30799045,30799127-30799216, 30799673-30799742,30800598-30800697,30800922-30801001, 30801347-30801412,30801489-30801597,30801862-30801905, 30802171-30802242,30803198-30803311,30804342-30804398 Length = 380 Score = 27.5 bits (58), Expect = 8.0 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 126 YISGVLGMDRDAQLVSGGVGAQTRQVLENLKHVV 227 YISGV G+D S VG LEN+ +V Sbjct: 137 YISGVKGLDSSGLSSSAAVGIAYLMALENVNDLV 170 >02_02_0497 + 10961079-10963824,10964182-10964282,10964759-10964800, 10966918-10966986 Length = 985 Score = 27.5 bits (58), Expect = 8.0 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = -2 Query: 415 LRAIASISTAAFRGSLVTWYVARAGQFLGKY 323 +RA+ SI ++ G +VTW AG + +Y Sbjct: 354 MRAVESIFRSSKMGDIVTWNTVIAGYVMNRY 384 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,851,516 Number of Sequences: 37544 Number of extensions: 347855 Number of successful extensions: 834 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 823 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 833 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1317005676 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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