Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L02
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical p... 123 8e-29
U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical p... 123 8e-29
U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical p... 123 8e-29
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 32 0.33
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 32 0.33
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 32 0.33
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 31 0.77
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 27 9.5
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 27 9.5
>U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical
protein C23G10.2c protein.
Length = 137
Score = 123 bits (297), Expect = 8e-29
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +3
Query: 33 AHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 212
A +V + I++S + +GPYSQA+ + T+Y+SG LG+D + GV QT Q L+N
Sbjct: 2 AQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKN 61
Query: 213 LKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQVTKLPLNAAV 392
L V++A G +V+KTT+LL N+ DF VN++Y +YF PARA YQV LP V
Sbjct: 62 LGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLV 121
Query: 393 EIEAIALSGDL 425
EIEA+A++G++
Sbjct: 122 EIEAVAIAGEI 132
>U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical
protein C23G10.2a protein.
Length = 171
Score = 123 bits (297), Expect = 8e-29
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +3
Query: 33 AHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 212
A +V + I++S + +GPYSQA+ + T+Y+SG LG+D + GV QT Q L+N
Sbjct: 36 AQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKN 95
Query: 213 LKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQVTKLPLNAAV 392
L V++A G +V+KTT+LL N+ DF VN++Y +YF PARA YQV LP V
Sbjct: 96 LGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLV 155
Query: 393 EIEAIALSGDL 425
EIEA+A++G++
Sbjct: 156 EIEAVAIAGEI 166
>U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical
protein C23G10.2b protein.
Length = 144
Score = 123 bits (297), Expect = 8e-29
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +3
Query: 33 AHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 212
A +V + I++S + +GPYSQA+ + T+Y+SG LG+D + GV QT Q L+N
Sbjct: 9 AQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKN 68
Query: 213 LKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQVTKLPLNAAV 392
L V++A G +V+KTT+LL N+ DF VN++Y +YF PARA YQV LP V
Sbjct: 69 LGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLV 128
Query: 393 EIEAIALSGDL 425
EIEA+A++G++
Sbjct: 129 EIEAVAIAGEI 139
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 7003 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 7049
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 9540 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 9586
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 7237 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 7287
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 9774 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 9824
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST N ++T + KP+GP Q + +D + YI V+G D A
Sbjct: 4334 ATDSTGNFVTENGDVITKDEEGKPLGPNGQILPTDASGNYIYPVIGPDGQA 4384
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
STDST N I+ D KP+GP Q + +D + Y+ V+G D
Sbjct: 5985 STDSTGNFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPD 6032
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDS+ N I+ D KP+GP QA+ +D + YI V+G D A
Sbjct: 5344 ATDSSGNFVTSSGDIIDIDDEGKPLGPDGQALPTDDSGNYIYPVIGPDGQA 5394
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
TDS+ + TI+ + D KP+GP Q + +D + YI V+G D A
Sbjct: 10692 TDSSGSFVTDDGTIIENDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10741
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + IV D KP+GP Q + +D + YI V+G D A
Sbjct: 11053 ATDSTGSFIASNGLIVEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 11103
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 7721 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 7771
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 8495 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 8545
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 10258 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10308
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT 122
+TDST + T++ D KPVGP Q + +D++
Sbjct: 5707 ATDSTGSFVTEDGTVIEKDDEGKPVGPDGQVLPTDES 5743
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
+TDST TIV + KP+GP Q + +D + YI V+G D
Sbjct: 10908 ATDSTGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGNYIYPVIGPD 10955
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + ++ + KP+GP Q + +D + YI V+G D A
Sbjct: 5200 ATDSTGSFVTDDDQVIAKDEDGKPIGPDGQVLPTDSSGNYIYPVIGPDGQA 5250
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 7048 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 7094
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 9585 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 9631
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 7282 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 7332
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 9819 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 9869
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST N ++T + KP+GP Q + +D + YI V+G D A
Sbjct: 4379 ATDSTGNFVTENGDVITKDEEGKPLGPNGQILPTDASGNYIYPVIGPDGQA 4429
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
STDST N I+ D KP+GP Q + +D + Y+ V+G D
Sbjct: 6030 STDSTGNFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPD 6077
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDS+ N I+ D KP+GP QA+ +D + YI V+G D A
Sbjct: 5389 ATDSSGNFVTSSGDIIDIDDEGKPLGPDGQALPTDDSGNYIYPVIGPDGQA 5439
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
TDS+ + TI+ + D KP+GP Q + +D + YI V+G D A
Sbjct: 10737 TDSSGSFVTDDGTIIENDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10786
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + IV D KP+GP Q + +D + YI V+G D A
Sbjct: 11098 ATDSTGSFIASNGLIVEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 11148
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 7766 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 7816
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 8540 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 8590
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 10303 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10353
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT 122
+TDST + T++ D KPVGP Q + +D++
Sbjct: 5752 ATDSTGSFVTEDGTVIEKDDEGKPVGPDGQVLPTDES 5788
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
+TDST TIV + KP+GP Q + +D + YI V+G D
Sbjct: 10953 ATDSTGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGNYIYPVIGPD 11000
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + ++ + KP+GP Q + +D + YI V+G D A
Sbjct: 5245 ATDSTGSFVTDDDQVIAKDEDGKPIGPDGQVLPTDSSGNYIYPVIGPDGQA 5295
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 7048 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 7094
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 9585 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 9631
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 7282 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 7332
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 9819 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 9869
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST N ++T + KP+GP Q + +D + YI V+G D A
Sbjct: 4379 ATDSTGNFVTENGDVITKDEEGKPLGPNGQILPTDASGNYIYPVIGPDGQA 4429
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
STDST N I+ D KP+GP Q + +D + Y+ V+G D
Sbjct: 6030 STDSTGNFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPD 6077
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDS+ N I+ D KP+GP QA+ +D + YI V+G D A
Sbjct: 5389 ATDSSGNFVTSSGDIIDIDDEGKPLGPDGQALPTDDSGNYIYPVIGPDGQA 5439
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 15 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
TDS+ + TI+ + D KP+GP Q + +D + YI V+G D A
Sbjct: 10737 TDSSGSFVTDDGTIIENDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10786
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + IV D KP+GP Q + +D + YI V+G D A
Sbjct: 11098 ATDSTGSFIASNGLIVEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 11148
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 7766 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 7816
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 8540 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 8590
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 10303 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10353
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT 122
+TDST + T++ D KPVGP Q + +D++
Sbjct: 5752 ATDSTGSFVTEDGTVIEKDDEGKPVGPDGQVLPTDES 5788
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 152
+TDST TIV + KP+GP Q + +D + YI V+G D
Sbjct: 10953 ATDSTGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGNYIYPVIGPD 11000
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 12 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 161
+TDST + ++ + KP+GP Q + +D + YI V+G D A
Sbjct: 5245 ATDSTGSFVTDDDQVIAKDEDGKPIGPDGQVLPTDSSGNYIYPVIGPDGQA 5295
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 82 RLDPTVKPFYLTRLSIYREYSAW 150
R D VK F+L LS+ REY AW
Sbjct: 247 RTDSDVKKFHLLHLSLLREYLAW 269
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 422 PRHHRSWTLSLCTHL 466
P HHR+ T S+C HL
Sbjct: 10 PHHHRTQTTSVCNHL 24
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 422 PRHHRSWTLSLCTHL 466
P HHR+ T S+C HL
Sbjct: 10 PHHHRTQTTSVCNHL 24
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 167 GIWWSGSTDAPSFRKLEACS*GGRWIFGVSYKDHNTACEYGRFSMR 304
G W G D +++L+ G + S+KD +T YG + R
Sbjct: 374 GTVWDGIDDEKIYKQLDLTELSGCFAASSSHKDEDTDTLYGTINRR 419
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 457 AQGQGPASVMTRSPLRAIASISTAAFRGSLVTWYV 353
A G A V T SP+++ ++ S AA S + WY+
Sbjct: 609 ASGAAHAPV-TESPIKSTSTASNAATEASNMVWYI 642
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,578,193
Number of Sequences: 27780
Number of extensions: 294791
Number of successful extensions: 874
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -