Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L01
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    28   0.039
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   2.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.8  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 28.3 bits (60), Expect = 0.039
 Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   FIKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQ 181
           +IK       P+ K ++F + +  +  + E  F GKH       +      H+  +AN +
Sbjct: 45  YIKVEADEEAPVLKSRSFGRKRKSISSDEENSFQGKHKSRRKAPQSFEDIQHQRVMANVR 104

Query: 182 KRPRSRTLTSVYDAILEDL-VFPAEIVGKRIRVKL 283
           +R R+++L   + ++ + +   P++ + K   +KL
Sbjct: 105 ERQRTQSLNEAFASLRKSIPTMPSDKLSKIQTLKL 139


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -1

Query: 276 TLMRLPTISAGNTRSSNMASYTEVSVLERGLFC-LLATRVLWLGLGRILRSPTNTTCLPL 100
           TL     + A N          +++VLE G FC +   R L +G+ R +++    + L  
Sbjct: 527 TLSNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKNFNIPSILQF 586

Query: 99  N 97
           N
Sbjct: 587 N 587


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -1

Query: 135 LRSPTNTTCLPLNFFSNSRTSLIWIFWNAFSLG 37
           L +PT T      F+   + +++W+ +    LG
Sbjct: 31  LTTPTPTDINSFYFYKTEQFTVLWVLFTMIVLG 63


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 21  SFMCRCP 41
           +FMCRCP
Sbjct: 165 TFMCRCP 171


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 470 FFLLQFYFYCKIV 432
           F L  +YFYC ++
Sbjct: 281 FLLCIYYFYCALI 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,831
Number of Sequences: 336
Number of extensions: 2672
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)