Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K24
         (529 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever...    28   9.0  
U02279-1|AAA18301.1|  964|Drosophila melanogaster protein ( Dros...    28   9.0  
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ...    28   9.0  
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ...    28   9.0  
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ...    28   9.0  
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ...    28   9.0  

>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
           transcriptase protein.
          Length = 1084

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 335 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 442
           ++F    LG Q KFI   D NA   +WG  R   RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


>U02279-1|AAA18301.1|  964|Drosophila melanogaster protein (
           Drosophila melanogastertelomere-associated transposons
           TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
           cds. ).
          Length = 964

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 335 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 442
           ++F    LG Q KFI   D NA   +WG  R   RG
Sbjct: 19  LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 54


>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 335 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 442
           ++F    LG Q KFI   D NA   +WG  R   RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 335 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 442
           ++F    LG Q KFI   D NA   +WG  R   RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
           protein.
          Length = 1042

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 335 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 442
           ++F    LG Q KFI   D NA   +WG  R   RG
Sbjct: 97  LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 132


>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 335 IHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRG 442
           ++F    LG Q KFI   D NA   +WG  R   RG
Sbjct: 135 LNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,590,601
Number of Sequences: 53049
Number of extensions: 406015
Number of successful extensions: 871
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)