Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K22
         (421 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   0.68 
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.3  
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.3  

>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3610

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -3

Query: 275  ASASRASLRTMLFLPRVEFIDEDYGFQSMSKAFVIDAHE 159
            AS S  S RT + + RVE  DED G+  M   F++  +E
Sbjct: 2098 ASVSE-STRTGVAVTRVEATDEDTGYNGMMNYFIVQGNE 2135


>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3261

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = -2

Query: 411  ECTEACAESQGDSYTTNSRWS*NLFQLRRNLCSNMFLVH-RSLFR*RQCISSESADDVVL 235
            EC + C +   +   TN +   N   +R+  C N  +V  RS+ R   C+  +       
Sbjct: 1789 ECPKDCPKEDAEVCGTNWKTYTNECMMRKQACMNNSMVTVRSIGRCDPCVRYDCGSTNPY 1848

Query: 234  TTCR 223
            +TC+
Sbjct: 1849 STCK 1852


>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1000

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 300 LKTYWNKGFDATGTGFKTIESWWYKSPLGFPHT 398
           ++++  K FD      + +ESWW K  +   H+
Sbjct: 810 MRSHTGKKFDCPECSRQFVESWWLKKHIELKHS 842


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,882,908
Number of Sequences: 59808
Number of extensions: 283543
Number of successful extensions: 681
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)