Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K22
         (421 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209701-1|BAD92938.1|  484|Homo sapiens sparc/osteonectin, cwcv...    29   4.8  
X73608-1|CAA51999.1|  439|Homo sapiens testican protein.               29   8.4  
BC030691-1|AAH30691.1|  439|Homo sapiens sparc/osteonectin, cwcv...    29   8.4  
AF231124-1|AAF43687.1|  439|Homo sapiens testican-1 protein.           29   8.4  

>AB209701-1|BAD92938.1|  484|Homo sapiens sparc/osteonectin, cwcv
           and kazal-like domains proteoglycan precursor variant
           protein.
          Length = 484

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 269 HWRYLNRDRWTKNILEQRFRRNWNRFQDHRE 361
           H  +L+ D+W   + +    + WNRF+D  E
Sbjct: 77  HGNFLDNDQWLSTVSQYDRDKYWNRFRDEVE 107


>X73608-1|CAA51999.1|  439|Homo sapiens testican protein.
          Length = 439

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 269 HWRYLNRDRWTKNILEQRFRRNWNRFQD 352
           H  +L+ D+W   + +    + WNRF+D
Sbjct: 35  HGNFLDNDQWLSTVSQYDRDKYWNRFRD 62


>BC030691-1|AAH30691.1|  439|Homo sapiens sparc/osteonectin, cwcv
           and kazal-like domains proteoglycan (testican) 1
           protein.
          Length = 439

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 269 HWRYLNRDRWTKNILEQRFRRNWNRFQD 352
           H  +L+ D+W   + +    + WNRF+D
Sbjct: 35  HGNFLDNDQWLSTVSQYDRDKYWNRFRD 62


>AF231124-1|AAF43687.1|  439|Homo sapiens testican-1 protein.
          Length = 439

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 269 HWRYLNRDRWTKNILEQRFRRNWNRFQD 352
           H  +L+ D+W   + +    + WNRF+D
Sbjct: 35  HGNFLDNDQWLSTVSQYDRDKYWNRFRD 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,539,287
Number of Sequences: 237096
Number of extensions: 1291414
Number of successful extensions: 2507
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2507
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)