Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K22
         (421 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE...    27   5.2  
At1g73280.1 68414.m08480 serine carboxypeptidase S10 family prot...    27   5.2  
At5g39785.2 68418.m04819 expressed protein                             27   6.8  
At5g39785.1 68418.m04818 expressed protein                             27   6.8  

>At2g31510.1 68415.m03850 IBR domain-containing protein /
           ARIADNE-like protein ARI7 (ARI7) identical to
           ARIADNE-like protein ARI7 [Arabidopsis thaliana]
           GI:29125028; contains similarity to Swiss-Prot:Q94981
           ariadne-1 protein (Ari-1) [Drosophila melanogaster];
           contains Pfam profile PF01485: IBR domain
          Length = 562

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -3

Query: 404 QKRVRKAKGTL----IPPTLDGLETCSSCVETFVP 312
           ++RVRK  G L    +PP+ D   TC  C +++ P
Sbjct: 112 EERVRKTVGILESHVVPPSDDSELTCGICFDSYPP 146


>At1g73280.1 68414.m08480 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase I precursor
           (SP:P07519) [Hordeum vulgare]; glucose acyltransferase
           GB:AAD01263 [Solanum berthaultii]; contains Pfam
           profile: PF00450 Serine carboxypeptidase;
          Length = 441

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = +3

Query: 33  YVARMRRLNHEPFKVSIDVMSDKAVDAVVRIFIGPRYDCLGRLMSINDKRLGHALKSIVF 212
           ++ + +  +  PF V  D  S   V A V+      Y+C    +++    LG+ L   V+
Sbjct: 166 WLGKHQEFSSNPFYVGGDSYSGMVVPATVQEISKGNYECCNPPINLQGYVLGNPLTDFVY 225

Query: 213 VY 218
            Y
Sbjct: 226 DY 227


>At5g39785.2 68418.m04819 expressed protein
          Length = 607

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 254 DSLEMHWRYLNRDRWTKNILEQRFRRNWNRFQDHRE 361
           +++ + WR++  D+ T +I +Q+ R       DH E
Sbjct: 468 ETIRLFWRFVRCDKLTSSIHDQKSRTKSQIEPDHEE 503


>At5g39785.1 68418.m04818 expressed protein
          Length = 606

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 254 DSLEMHWRYLNRDRWTKNILEQRFRRNWNRFQDHRE 361
           +++ + WR++  D+ T +I +Q+ R       DH E
Sbjct: 468 ETIRLFWRFVRCDKLTSSIHDQKSRTKSQIEPDHEE 503


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,428,714
Number of Sequences: 28952
Number of extensions: 189225
Number of successful extensions: 488
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)