Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_K17
(179 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g14700.1 68414.m01757 purple acid phosphatase, putative conta... 27 1.7
At5g07400.1 68418.m00847 forkhead-associated domain-containing p... 25 5.3
At4g24150.1 68417.m03465 expressed protein ; expression supporte... 25 5.3
At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transfera... 25 5.3
At1g58440.1 68414.m06648 squalene monooxygenase, putative / squa... 25 5.3
At5g21080.1 68418.m02510 expressed protein predicted proteins - ... 25 7.1
At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase fam... 25 7.1
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 25 7.1
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 25 7.1
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical... 25 9.3
>At1g14700.1 68414.m01757 purple acid phosphatase, putative contains
Pfam profile: PF00149 calcineurin-like phosphoesterase;
similar to purple acid phosphatase (GI:20257479)
[Arabidopsis thaliana]
Length = 366
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -1
Query: 83 RWNTTIVHHVNSVCGSHGQYGEEEKH 6
+W I HH G HG E EKH
Sbjct: 239 KWKIVIGHHTIKSAGHHGNTIELEKH 264
>At5g07400.1 68418.m00847 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1084
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 66 NSGVPSDGNSDHVVIANPD 122
N+ VP+D N+ V++ NPD
Sbjct: 661 NTNVPADPNAVRVLVPNPD 679
>At4g24150.1 68417.m03465 expressed protein ; expression supported
by MPSS
Length = 493
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 45 NRVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNG 149
N+ + +SG+ + S + DPFFS S+G
Sbjct: 102 NQAYTSSHSGMFTPAGSGSAAVTVADPFFSLSSSG 136
>At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 456
Score = 25.4 bits (53), Expect = 5.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 4 SCFSSSPYWPWLP 42
SC SSP+ PW+P
Sbjct: 105 SCIISSPFTPWVP 117
>At1g58440.1 68414.m06648 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2) 6566341 dbj AB008021.1 AB008021
Length = 531
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 57 VVDNSGVPSDGNSDHVVIANPDPFFSQP 140
V++N +P N HVV+A+P P P
Sbjct: 244 VLENCNLPY-ANHGHVVLADPSPILMYP 270
>At5g21080.1 68418.m02510 expressed protein predicted proteins -
Arabidopsis thaliana; expression supported by MPSS
Length = 980
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 72 GVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 164
G P+ N N PFF+ PS+ P N+
Sbjct: 940 GAPAASNICVTEYQNQPPFFNPPSSTPFDNF 970
>At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase family
protein similar to peroxisomal-coenzyme A synthetase
(FAT2) [gi:586339] from Saccharomyces cerevisiae;
contains Pfam AMP-binding enzyme domain PF00501;
identical to cDNA; identical to cDNA adenosine
monophosphate binding protein 3 AMPBP3
(AMPBP3)GI:20799714
Length = 514
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 10 FSSSPYWPWLPQTEFTWWTIV 72
FS++ +WP + + TW+T V
Sbjct: 240 FSATTFWPDMKKYNATWYTAV 260
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 60 VDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGN 161
VD+ VP G S + P+P + P N P N
Sbjct: 434 VDSLFVPRAGPSSAIHTPQPNPTWIPPQNAPPHN 467
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 60 VDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGN 161
VD+ VP G S + P+P + P N P N
Sbjct: 434 VDSLFVPRAGPSSAIHTPQPNPTWIPPQNAPPHN 467
>At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical to
EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076;
member of the natural resistance-associated macrophage
protein (NRAMP) metal transporter family, PMID:11500563;
metal transport capacity has not been shown,
PMID:11500563, PMID:1038174
Length = 1294
Score = 24.6 bits (51), Expect = 9.3
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 72 GVPSDGNSDHV--VIANPDPFFSQP 140
GVPS GN+D V +AN + S P
Sbjct: 902 GVPSSGNTDTVGAAVANEKKYSSMP 926
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,293,184
Number of Sequences: 28952
Number of extensions: 68683
Number of successful extensions: 191
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 12,070,560
effective HSP length: 39
effective length of database: 10,941,432
effective search space used: 218828640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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