Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K16
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.5  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 455 RYHTRGCILVLKCNSPRISQLFVVMFHQC*ELMFALDLVTVFG 327
           R  +RG I   K  + +I+ + V +F  C       DL+ VFG
Sbjct: 235 RASSRGLIPRAKVKTIKITFVIVSVFILCWSPYIIFDLLQVFG 277


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 455 RYHTRGCILVLKCNSPRISQLFVVMFHQC*ELMFALDLVTVFG 327
           R  +RG I   K  + +++ + V +F  C       DL+ V+G
Sbjct: 270 RASSRGIIPRAKIKTVKMTLVIVFVFVLCWSPYIVFDLLQVYG 312


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 197  WNKSQDGNRPEWIPIQ 244
            WN     N PEW P +
Sbjct: 1358 WNPGSTTNYPEWQPTE 1373


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 458 NRYHTRGCILVLKCNSPRISQLFV 387
           + Y  RG   VLKCN P     FV
Sbjct: 131 SEYVIRGNTAVLKCNIPSFVADFV 154


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 185 DKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNNYN 286
           D N  N  ++GN  ++  I  G  + Y +   Y+
Sbjct: 460 DSNNNNNKEEGNSCQYCNIAFGDAVLYTIHMGYH 493


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 494 HKIVFPGFCKFYNRYHTR 441
           H   F G C FY ++  R
Sbjct: 534 HVRAFLGLCNFYRKFCAR 551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,783
Number of Sequences: 336
Number of extensions: 3362
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)