Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K12
         (538 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   4.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   8.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.0  

>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 482 YLNFVNYNKYKKR 444
           Y N+ NYN Y K+
Sbjct: 91  YSNYNNYNNYNKK 103


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 57  SSPYWPWLPQTECTWSIITLIIIQA 131
           S+P W + P    TW  I ++++ A
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVVLFA 573


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 14/56 (25%), Positives = 22/56 (39%)
 Frame = +2

Query: 170 GNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLARGG 337
           GN+  + I  P P   +         EP +  P ++    P +P  R + P A  G
Sbjct: 71  GNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRRE-PEAEPG 125


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +2

Query: 203 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRY 313
           DP+F + ++        ++     +D NHP +  K Y
Sbjct: 171 DPWFPRHASDLDNCNHLMTKFEPDLDMNHPGFADKEY 207


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 89  RVHVVDHNPDYNPGQVHV 142
           R + +  +PD + GQ+H+
Sbjct: 897 RFYSISSSPDVHQGQIHL 914


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,644
Number of Sequences: 438
Number of extensions: 3303
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)