Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_K10
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 29 3.0
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 29 3.0
SB_43460| Best HMM Match : Keratin_B2 (HMM E-Value=0.68) 29 4.0
SB_17184| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_21974| Best HMM Match : Ail_Lom (HMM E-Value=4.4) 27 9.3
SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41) 27 9.3
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 450 LAMCSVQHLNHSTSTPSCPVRLTFTKPHFET 542
L+ CS+Q L +T T P+R++F++PH T
Sbjct: 1421 LSTCSLQSLTDNT-TSERPIRISFSEPHLHT 1450
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 164 TGYYPLMT-SYYFPF--AQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKK 334
T Y P T S Y Q+P+N++LH +A+ T L GKF+S G+
Sbjct: 4715 TSYQPAATDSLYISSQSTQKPNNHHLHRTCKADALEV----NVTLRGGLHAGKFKSVGRT 4770
Query: 335 IDFHD 349
D H+
Sbjct: 4771 RDVHE 4775
>SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 356 PFHRGNQFSCHTIRICLSVGTVRKSFQKCPRTVLL-RSSLRCVDC 225
P H NQ C IC+ G KS KCP L S RC C
Sbjct: 245 PCHEANQGGCEGRAICVYTGP-GKSICKCPPGYKLDESQARCTLC 288
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Frame = +2
Query: 299 LQKGKFE-----SYGKKIDFHDEKAINFVGNYWQENADL--YEEEVTKDYQ 430
L+KGKF+ S K ID E+ F+G+ W ++ DL +++E K+ Q
Sbjct: 1093 LEKGKFQVKQWCSNSKTIDKSCERYCTFLGHKWDKDRDLLTFKKEKIKETQ 1143
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 39 LSIAVAKYITISTNN*QHVITS-SVLQTAWVPYLNSLGTRLLR 164
+ +A AKYI +S + + VI + S + +PY NS+ T +LR
Sbjct: 165 IQLAEAKYINVSLHFLEQVIVALSEKSRSHIPYRNSMMTSVLR 207
>SB_43460| Best HMM Match : Keratin_B2 (HMM E-Value=0.68)
Length = 306
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 461 LGAAPKPFDKHTFMPSALDFYQTALRDPAFYQLYYRIVGYINAFSI 598
+G + + F+P+ L F T+ D FY R +G IN++SI
Sbjct: 1 MGVTLRRAKEKRFIPADLSFGITSFYDVYFYSPRNRSLGIINSYSI 46
>SB_17184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 28.3 bits (60), Expect = 5.3
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Frame = +2
Query: 17 SSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWYSPIKTGYYPLMTSYY 196
S ER ++RG Y Y++ R Y G E + K GY Y
Sbjct: 124 SYERSYERSYKRG--YERSYERSYERGYKRSYERGNKRSYERGYKRGYKRGYERGYERSY 181
Query: 197 FPFAQRP--DNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHDEKAI--N 364
+R +Y V++YE + +++++ +S ++ SY + + E++ +
Sbjct: 182 KRSYERSYERSYKRSYVRSYER-SYKRSYKRSYKRSYKRSYKRSYKRSYERSYERSYKRS 240
Query: 365 FVGNYWQENADLYEEEVTKDYQRSYE 442
+ +Y + YE + Y+RSYE
Sbjct: 241 YKRSYERSYERSYERSYERSYERSYE 266
>SB_21974| Best HMM Match : Ail_Lom (HMM E-Value=4.4)
Length = 463
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 414 LQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHSI-----SYITGLWV 578
++ I ++KLSL + ++ ST S +F K HF H + + IT V
Sbjct: 323 MESYITMMLKLSLLFIIWKRHHYDRSTLSMLSDFSFHKQHFSQYHELKKKWMALITEKKV 382
Query: 579 TLTHSALPEALSS 617
+ HS L +SS
Sbjct: 383 EIWHSVLRSFISS 395
>SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41)
Length = 1069
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 314 FESYGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVAR 454
FE Y ++ DEKA ++ Y ++ A + E +RSY + +
Sbjct: 138 FEIYVSLNEWQDEKAGQYLAVYLKDEAKAFYHEQEDSVRRSYRALCK 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,049,333
Number of Sequences: 59808
Number of extensions: 423136
Number of successful extensions: 1197
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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