Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_K08
(246 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 29 0.11
SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 1.1
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 25 1.4
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 1.4
SPAC186.02c |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 25 1.8
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 24 3.2
SPAC977.16c |dak2||dihydroxyacetone kinase Dak2 |Schizosaccharom... 23 4.3
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 23 4.3
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 23 4.3
SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 23 5.6
SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 5.6
SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|... 23 5.6
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 23 5.6
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 23 5.6
SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 5.6
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 23 7.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 23 7.4
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 22 9.8
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 22 9.8
SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor |Schizo... 22 9.8
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 22 9.8
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 22 9.8
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 22 9.8
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 28.7 bits (61), Expect = 0.11
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 13 GKRLGIVGSGLIGRSWA 63
GKR+GI+G G IG+S+A
Sbjct: 159 GKRVGIIGMGAIGKSFA 175
>SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 108
Score = 25.4 bits (53), Expect = 1.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 62 LCCSASVGYHVTLFRYLLKSQLPDAIADIKGAIENFRERW 181
L + VGY++T S+L A+I A+EN +R+
Sbjct: 10 LAAAVGVGYYMTRHNRQASSRLEQKNAEIVRAVENEGQRF 49
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 1.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 68 NIAHDLPISPLPTIPNLFPDL 6
N+A D+ + +PT+PNL P +
Sbjct: 559 NVAGDMIQAKIPTLPNLCPGI 579
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.0 bits (52), Expect = 1.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 95 LRGIRLKRNNIAHDLPISPLPTIPNLFPDLN 3
LR +R+ NN H L + P + L+ DLN
Sbjct: 781 LRILRIS-NNAIHQLEVDQFPHLRTLYMDLN 810
>SPAC186.02c |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 332
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 13 GKRLGIVGSGLIGRSWAMLFR 75
GK +G++G+G IG + A F+
Sbjct: 144 GKTVGVIGTGKIGSNVAKCFK 164
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 56 DLPISPLPTIPNLFPDL 6
DL IS L T+P+ FP L
Sbjct: 205 DLSISSLYTLPSFFPQL 221
>SPAC977.16c |dak2||dihydroxyacetone kinase Dak2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 23.4 bits (48), Expect = 4.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 119 FSTNSGTKLRGIRLKRNNIAHDLPISPLPTIPNLFPDL 6
F TN G I + +N SPLP+IP L ++
Sbjct: 207 FETNLGPDEYEIGMGIHNEPGTFKSSPLPSIPELVTEM 244
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 23.4 bits (48), Expect = 4.3
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 217 NCSSAFRFPLRSPSFSKVFNGPLNISDC 134
N + ++P +P F + LN+SDC
Sbjct: 316 NLNGDIQYPAVTPKFFQQEGRALNVSDC 343
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 23.4 bits (48), Expect = 4.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 9 IWKKVGNCWEWTDR 50
+W+ +GNC+E DR
Sbjct: 442 MWQALGNCYEKIDR 455
>SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 674
Score = 23.0 bits (47), Expect = 5.6
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 213 VHPHLDSPLGVHLSLKFSMAPLISAIASGNWL 118
+HP+++ + + L + A LI+ + S WL
Sbjct: 306 LHPNVEKYISLDLQILGFFAKLINLVPSMKWL 337
>SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 23.0 bits (47), Expect = 5.6
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 12 WKKVGNCWEWTDREIMGYVVPLQSDTT 92
W+K ++ I+G+++P +S TT
Sbjct: 231 WRKENVSYKHWIHNIIGFILPSESSTT 257
>SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|chr
3|||Manual
Length = 393
Score = 23.0 bits (47), Expect = 5.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 24 GNCWEWTDREIMGYVVPLQSDTT*LCSAIC*KANYPMQSLILRGPLKTLEKDG-LLRG-N 197
G +EWT EI V+ + + LC C A ++ I G LE G +RG N
Sbjct: 318 GKHFEWTGCEIEASVLFIMGNVLFLCEMECPGALIRTRNSIRNGIAFILEGAGRAIRGAN 377
Query: 198 LNAD 209
N D
Sbjct: 378 DNND 381
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 13 GKRLGIVGSGLIGRSWA 63
GK LGI+G G IG++ A
Sbjct: 156 GKTLGILGLGGIGKTMA 172
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -1
Query: 126 NWLFNK*RNKVTWYPTEAEQHSP*SPDQSTPNNSQPFSRFK 4
N++ N + +++ + H P P+ +T ++QPFS +
Sbjct: 275 NYISNMLFDAISYTDSCLAIHLPFIPESTTREDNQPFSEIR 315
>SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 330
Score = 23.0 bits (47), Expect = 5.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2
Query: 56 DLPISPLPTIPNLF 15
D I+P+PT+P++F
Sbjct: 172 DTSINPIPTLPSVF 185
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 22.6 bits (46), Expect = 7.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 77 SVGYHVTLFRYLLKSQLPDA 136
++GY+ L R LL + PDA
Sbjct: 12 AIGYNYNLIRELLDEKNPDA 31
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 22.6 bits (46), Expect = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 192 PLGVHLSLKFSMAPLISAIAS 130
P VHLS FS AP +S I S
Sbjct: 723 PEAVHLSTAFSTAP-VSTIVS 742
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 22.2 bits (45), Expect = 9.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 32 LGVD*SGDHGLCCSASVGYHVTLFRYLLK 118
+GV G+ G + S Y + FR+L K
Sbjct: 1025 IGVGIVGEEGRAAAMSADYAIGQFRFLSK 1053
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 22.2 bits (45), Expect = 9.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 48 REIMGYVVPLQSDTT*LCSAIC*KANYPMQSLILRGPLKTLEKDGLLRGNLNADEQF 218
R +M +Q D SA N + + ++ GP T +DG + L+ DEQ+
Sbjct: 7 RRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQY 63
>SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 456
Score = 22.2 bits (45), Expect = 9.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 44 SPLPTIPNLFPDLN 3
SPLPT+ ++ P+ N
Sbjct: 46 SPLPTVSDVLPETN 59
>SPBC16H5.11c |skb1|rmt5|type II protein arginine
N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 645
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 5 LNLEKGWELLGVD*SGD 55
L+LE+G+E +GV SG+
Sbjct: 39 LSLEEGFEFVGVPLSGE 55
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 22.2 bits (45), Expect = 9.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 171 LKFSMAPLISAIASGNWLFNK*RNKVTW 88
LK ++ L+ AIASGN + K W
Sbjct: 176 LKMALWKLVPAIASGNCVVLKPSELAPW 203
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 22.2 bits (45), Expect = 9.8
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 1 RFKSGKRLGIVGSGLIGRSWAMLFRFSRIPRNFVPLFVEK 120
RF K L + RSW + F RN++ L+ +K
Sbjct: 327 RFIFQKTLHDIQQKHYARSWPAIKAFCEKRRNYIKLYKKK 366
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,120,117
Number of Sequences: 5004
Number of extensions: 20543
Number of successful extensions: 72
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 43306998
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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