BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_K08 (246 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0111 + 26552513-26553361 32 0.074 12_01_0527 - 4177928-4178235,4178849-4181438 31 0.17 02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963 27 1.6 07_01_0669 + 5027465-5027547,5027858-5027900,5028366-5028395 27 2.8 04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,572... 27 2.8 03_04_0206 - 18493178-18495310 27 2.8 01_06_0778 - 31920956-31921502,31921639-31921771,31922287-319223... 27 2.8 02_02_0640 - 12528075-12528363,12531326-12532311 26 3.7 01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 26 3.7 11_06_0119 + 20321687-20323624 26 4.9 01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 26 4.9 11_06_0306 + 22223514-22224095,22225426-22225638,22226310-222265... 25 6.4 06_02_0085 + 11555539-11555632,11555767-11555867,11556947-115570... 25 6.4 04_01_0038 + 446314-446787,446829-447350 25 6.4 02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 25 6.4 06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 25 8.5 04_04_1463 + 33787799-33787973,33788669-33789096 25 8.5 04_04_0604 - 26546363-26548363 25 8.5 03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 25 8.5 >01_06_0111 + 26552513-26553361 Length = 282 Score = 31.9 bits (69), Expect = 0.074 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +2 Query: 50 GDHGLCCSASVGYHVTLFRYLLKSQLPDAIADIKGAIENFR 172 G+H C ++++G + L RYLL S LPDA I G+ ++ R Sbjct: 217 GEHPGCRASTLGLLLLLCRYLL-SPLPDATTSINGSNDSGR 256 >12_01_0527 - 4177928-4178235,4178849-4181438 Length = 965 Score = 30.7 bits (66), Expect = 0.17 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -2 Query: 98 KLRGIRLKRNNIAHDLPISPLPTIPNLFPDLN 3 KLR + L NN+A D+P S P++ L +N Sbjct: 189 KLRSLNLSSNNLAGDVPTSMTPSLEELVLSIN 220 >02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963 Length = 288 Score = 27.5 bits (58), Expect = 1.6 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -2 Query: 140 RLHRVIGFSTNSGTKLRGIRLKRNNIAHDLPISPLPTIPNL 18 R+ RV S ++ T L+ I LK NN +L +PNL Sbjct: 48 RMSRVFPSSLSNFTSLKIINLKHNNFTGELSKVNFSRLPNL 88 >07_01_0669 + 5027465-5027547,5027858-5027900,5028366-5028395 Length = 51 Score = 26.6 bits (56), Expect = 2.8 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +1 Query: 7 KSGKRLGIVGSGLIGRSWAMLFRFSRIP 90 + G R GIVG G W ++++F+ P Sbjct: 11 RGGCRRGIVGQGATKVGWLLVYKFANNP 38 >04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210, 5724297-5724558,5724662-5724960,5725040-5725453, 5725533-5725899,5726002-5726146,5726562-5727558 Length = 1015 Score = 26.6 bits (56), Expect = 2.8 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = -1 Query: 123 WLFNK*RNKVTWYPTEAEQHSP*SPDQSTPNNSQPFSR 10 W + R +VT+ PTE + H+ + D + Q F+R Sbjct: 790 WYQPRTRTRVTYAPTEQQAHAASARDLYARHRDQDFAR 827 >03_04_0206 - 18493178-18495310 Length = 710 Score = 26.6 bits (56), Expect = 2.8 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +1 Query: 1 RFKSGKRLGIVGSGLIGRSW---AMLFRFSRIPRNFVPLFVEKPITRCNR 141 R G+R G+VG +G+S + +R +PR+ L VE+ I NR Sbjct: 179 RISHGRRYGLVGPNGMGKSTLLKLLSWRQVPVPRSIDVLLVEQEIIGDNR 228 >01_06_0778 - 31920956-31921502,31921639-31921771,31922287-31922374, 31922857-31923198 Length = 369 Score = 26.6 bits (56), Expect = 2.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +2 Query: 125 LPDAIADIKGAIENFRERWTPK 190 +PD +ADI +E ERW P+ Sbjct: 55 VPDLLADILRCVEAGSERWPPR 76 >02_02_0640 - 12528075-12528363,12531326-12532311 Length = 424 Score = 26.2 bits (55), Expect = 3.7 Identities = 8/25 (32%), Positives = 17/25 (68%) Frame = +3 Query: 12 WKKVGNCWEWTDREIMGYVVPLQSD 86 W+++G+ WE +RE +G V + ++ Sbjct: 288 WREIGDMWEEWERERLGPVAVISAE 312 >01_06_1097 + 34507376-34507395,34509380-34511214,34511263-34511598, 34511800-34513691 Length = 1360 Score = 26.2 bits (55), Expect = 3.7 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +1 Query: 46 IGRSWAMLFRFSRIPRNFVPLFVEKPITRCNR 141 IGR+ A L RFSR FVP VE ++ R Sbjct: 582 IGRTDATLERFSRFKPYFVPETVEGSLSNFQR 613 >11_06_0119 + 20321687-20323624 Length = 645 Score = 25.8 bits (54), Expect = 4.9 Identities = 16/52 (30%), Positives = 30/52 (57%) Frame = +2 Query: 89 HVTLFRYLLKSQLPDAIADIKGAIENFRERWTPKGESKCG*TVPNVLKGTCD 244 ++ L +L Q PD++ D+K A++ F R++ G S +PN+L+ C+ Sbjct: 268 YLDLIMNILPGQFPDSLGDMK-ALQVF--RFSSNGHSI---IMPNLLQNLCN 313 >01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 Length = 454 Score = 25.8 bits (54), Expect = 4.9 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 10 SGKRLGIVGSGLIGRSWAMLFRFSRIPRNF 99 SGKR+GI+G G IG + A P N+ Sbjct: 284 SGKRVGIIGLGRIGLAVAKRVEAFDCPVNY 313 >11_06_0306 + 22223514-22224095,22225426-22225638,22226310-22226576, 22227002-22227322 Length = 460 Score = 25.4 bits (53), Expect = 6.4 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +3 Query: 30 CWEWTDREIMGYVVPLQSDTT*LCSAIC*KANYPMQSLILRG 155 C +D + + P D LCS + K NYP ILRG Sbjct: 324 CMATSDNVVRAGLTPKYRDVQTLCSMLTYKQNYPE---ILRG 362 >06_02_0085 + 11555539-11555632,11555767-11555867,11556947-11557056, 11557152-11557227,11557412-11557555,11558432-11558503, 11558601-11559470 Length = 488 Score = 25.4 bits (53), Expect = 6.4 Identities = 15/53 (28%), Positives = 20/53 (37%) Frame = -1 Query: 180 HLSLKFSMAPLISAIASGNWLFNK*RNKVTWYPTEAEQHSP*SPDQSTPNNSQ 22 H+ FS SA+ GN K + + +SP P TP SQ Sbjct: 196 HVDQDFSRRDSFSAVQPGNNALRHSTEKFNDHVSAQSPYSPPPPQSQTPPQSQ 248 >04_01_0038 + 446314-446787,446829-447350 Length = 331 Score = 25.4 bits (53), Expect = 6.4 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +1 Query: 10 SGKRLGIVGSGLIG 51 SGKR+GIVG G IG Sbjct: 160 SGKRVGIVGLGSIG 173 >02_05_0622 + 30437533-30437577,30437694-30438177,30438301-30438354, 30438565-30438789,30438891-30438943,30439591-30439714, 30439823-30440077,30440171-30440517,30440661-30441266, 30441504-30441546,30441624-30441757 Length = 789 Score = 25.4 bits (53), Expect = 6.4 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -3 Query: 244 ITGTFQHIRNCSSAFRFP 191 ITGTF I+ CSS FP Sbjct: 351 ITGTFSIIKQCSSLSCFP 368 >06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274, 9046375-9046498,9047237-9047289,9047388-9047648, 9047795-9047848,9047975-9048458,9048554-9048592 Length = 772 Score = 25.0 bits (52), Expect = 8.5 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -3 Query: 244 ITGTFQHIRNCSSAFRFP 191 ITGTF I+ CSS FP Sbjct: 361 ITGTFSIIKQCSSLNCFP 378 >04_04_1463 + 33787799-33787973,33788669-33789096 Length = 200 Score = 25.0 bits (52), Expect = 8.5 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 161 ENFRERWTPKGESKC 205 EN+R RW + E KC Sbjct: 166 ENWRRRWISRSEGKC 180 >04_04_0604 - 26546363-26548363 Length = 666 Score = 25.0 bits (52), Expect = 8.5 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Frame = -2 Query: 125 IGFSTNSGTK-----LRGIRLKRNNIAHDLPISPLPTIPNLFP 12 +GFS+ +G + G K N A L IS LP++P FP Sbjct: 239 VGFSSATGILFCRHYVLGWSFKMNGAAPALNISSLPSLPVTFP 281 >03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806, 3523189-3523270,3523420-3523692,3523953-3524162, 3524252-3524337,3525197-3525289,3526003-3526227, 3526320-3526930,3529328-3529395,3529491-3529679, 3529773-3529901,3530013-3532484 Length = 1579 Score = 25.0 bits (52), Expect = 8.5 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 Query: 98 KLRGIRLKRNNIAHDLPISPLPTIPNLFPD 9 +L RLK + H++ S L T ++FPD Sbjct: 1428 RLESRRLKYTSFFHNINASSLRTAKDMFPD 1457 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,163,227 Number of Sequences: 37544 Number of extensions: 132183 Number of successful extensions: 404 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 395 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 403 length of database: 14,793,348 effective HSP length: 60 effective length of database: 12,540,708 effective search space used: 263354868 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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