SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K07
         (531 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    73   1e-13
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    72   2e-13
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    59   2e-09
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    37   0.010
AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical ...    32   0.29 
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    31   0.52 
AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-relat...    30   1.2  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-relat...    29   1.6  
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    29   1.6  
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    29   1.6  
Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U28742-2|AAA68332.2|  925|Caenorhabditis elegans Adaptin, alpha ...    28   4.8  
Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    27   8.4  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
 Frame = +1

Query: 13  HDIALIRLMVTA-PYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTV 189
           HDIA++ +      + ++ +PICLPS D+   P    +  V+GWG         GL    
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGR--QCVVSGWG-------SMGLRYAE 166

Query: 190 K-QHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGG-KPGEDACRGDSGGPLMYE-V 360
           + Q   +P ++R  C  + +         +++   CAG  + G D+C+GDSGGP      
Sbjct: 167 RLQAALIPIINRFDCVNSSQIYSS-----MSRSAFCAGYLEGGIDSCQGDSGGPFACRRE 221

Query: 361 GNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 480
              FV+ G +S+G   C  +  PG+YT V  Y+ WI + I
Sbjct: 222 DGAFVLAGVISWGDG-CAQKKQPGIYTMVAPYLSWISAII 260


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 72.1 bits (169), Expect = 2e-13
 Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
 Frame = +1

Query: 13  HDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTVK 192
           +D A++R+      +   RPICLPSL   +         V GWG     I G+ LS+   
Sbjct: 144 YDFAIMRIHPPVNTSTTARPICLPSLPAVENRLC----VVTGWG---STIEGSSLSAPTL 196

Query: 193 QHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGE-DACRGDSGGPLMYEVGNT 369
           + + +P +    C +    +      +     LCAG   G+ D+C+GDSGGPLM      
Sbjct: 197 REIHVPLLSTLFCSSLPNYI----GRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDGH 252

Query: 370 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWI 468
           + + G VS+G   C    +PGVY NV+    WI
Sbjct: 253 WELTGVVSWGIG-CARPGMPGVYGNVHSASTWI 284


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
 Frame = +1

Query: 13  HDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAGWGM-YKQFISGTG--LSS 183
           +DIAL+R+         ++P+CL   D ++         V G+G+   +  SG    ++S
Sbjct: 123 NDIALLRISSDLSKLG-IKPVCLVH-DDSKLLKQYKNGVVIGYGLTLGEDSSGEPKLINS 180

Query: 184 TVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGEDACRGDSGGPLMYEVG 363
              Q   +P +  D C    R L    ++ IT  Q+CAG      A  GDSGGPL+    
Sbjct: 181 QTLQSTSVPIISDDDCVKTWRFL-SLLSVKITGYQICAGAYLHGTA-PGDSGGPLLIHKS 238

Query: 364 N-TFVMVGSVSYGPK----YCGTRNIPGVYTNVYEYIPWIRSTI 480
           N  +V +G  SYG             PGVYT + +Y+PWI+  I
Sbjct: 239 NGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVI 282


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 4/153 (2%)
 Frame = +1

Query: 13  HDIALIRLMVTAPYTDFVRPICL--PSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSST 186
           HD A++ +     +++ VRPICL  P++ YT+       + V GWG  + F     L   
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPRPNMYYTK------SLAVPGWG--RIFNESGPLIHE 194

Query: 187 VKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGEDACRGDSGGPLMYEVGN 366
           +        +DRD  +     L       I    +          C GDSGG L Y   N
Sbjct: 195 IPMR-----IDRDCKRPWSDRLPADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDN 249

Query: 367 --TFVMVGSVSYGPKYCGTRNIPGVYTNVYEYI 459
                ++   S+G + C + N+   +T V  Y+
Sbjct: 250 YGRAFLIAITSFGTRGCPS-NMLARFTRVDMYL 281


>AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical
           protein F25E5.4 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 304 KPGEDACRGDSGGPLMYEVGNTFVMVGSVSYGPKYC 411
           K  +  C GD GG  +  + N F M+G  + G K C
Sbjct: 227 KQNQGLCSGDFGGSAVSRIDNRFTMLGFFAQGNKNC 262


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 31.1 bits (67), Expect = 0.52
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -2

Query: 386  DPTITKVLPTSYMRGPPESPLHASSPGLPPAHS 288
            DPT  K  P      PP SP+HAS P  PP  S
Sbjct: 1617 DPTAPKDSPLYSNIRPPTSPIHASVPVPPPRMS 1649


>AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical
           protein Y47H9C.6 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 127 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 32
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-related
           protein 3 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 127 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 32
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -2

Query: 413 PQYFGP*LTDPTITKVLPTSYMRGPPESPLHASS---PGLPPAHSCSLVITSASPP 255
           PQYF P        +  P  Y +  P+ PL       P  PP +S ++VI  A PP
Sbjct: 85  PQYFQP------QQQQQPVQYQQQQPQQPLQYQQQPQPAPPPIYSQTVVIPQAPPP 134


>AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-related
           protein 2B protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 127 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 32
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 185 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 216


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 127 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 32
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 127 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 32
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -2

Query: 446 TFVYTPGMFLVPQYFGP*LTDPTITKVLPTSYMRGPPESPLHASSPGLPP 297
           TF+  PG+F +  Y G     P    V P  ++  PPE   H S     P
Sbjct: 378 TFLLPPGIFPLVCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDP 427


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 319 ACRGDSGGPLMYEVGNTFVMVGSVSY 396
           AC GDSG P+   V    ++VG+V++
Sbjct: 209 ACMGDSGSPVYCFVNGKRILVGTVAH 234


>Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical
           protein F59F3.2 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 292 CAGGKPGEDACRGDSGGP 345
           C  G PGED  RG++G P
Sbjct: 157 CPQGPPGEDGLRGEAGEP 174


>U28742-2|AAA68332.2|  925|Caenorhabditis elegans Adaptin, alpha
           chain (clathrinassociated complex) protein 2 protein.
          Length = 925

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -1

Query: 525 LQKKLLLPVLIILGYYCTSYPWYVLVNVRI--YAGD 424
           ++++++L V I+   Y T Y WYV V +++   AGD
Sbjct: 419 IREEMVLKVAILAEKYATDYTWYVDVILKLIRIAGD 454


>Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical
           protein F26E4.3 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 152 SSSYLALVCRVQLNNTLNSHMLIETDVKQRKGHCVG 259
           SS  LA++   ++N+TL+S  L+  +  ++KG C G
Sbjct: 258 SSDRLAIISEGRINSTLSSQQLLSCNQHRQKG-CEG 292


>Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical
           protein F13E6.5 protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 513 LLLPVLIILGYYCTSYPWYVLVNVRIYAGDVPCAAI 406
           + L ++I+LG  C+ + W+    +  Y   +PC  I
Sbjct: 38  MALDIVIVLGISCSLFLWFSGSGINPYERAMPCGDI 73


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 283 EQLCAGGKPGEDACRGDSGGPLMYEVGNTF--VMVGSVSYG 399
           +  C   +  ++ C GDSGG L +   ++    ++  VSYG
Sbjct: 257 DSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYG 297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,262,635
Number of Sequences: 27780
Number of extensions: 348685
Number of successful extensions: 1266
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -