Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K05
         (452 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.3  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 419 GRVPRRARCTLSTSWGHSSPSRA 351
           GRVP+R +  +  +   SS SR+
Sbjct: 141 GRVPKREKARILAAMQQSSHSRS 163


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/41 (24%), Positives = 15/41 (36%)
 Frame = -2

Query: 433 NEVGWEESLAALVVPFPPVGVTRVRHVHCLAREERQLIVLR 311
           N + W  + A        +G+     V CL    R   V+R
Sbjct: 507 NHIRWNSAFAIAPAVISCLGIVATMAVACLLFHHRDTPVVR 547


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/41 (24%), Positives = 15/41 (36%)
 Frame = -2

Query: 433 NEVGWEESLAALVVPFPPVGVTRVRHVHCLAREERQLIVLR 311
           N + W  + A        +G+     V CL    R   V+R
Sbjct: 597 NHIRWNSAFAIAPAVISCLGIVATMAVACLLFHHRDTPVVR 637


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,455
Number of Sequences: 438
Number of extensions: 641
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)