Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K04
         (482 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical ...    31   0.44 
Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z79694-7|CAB01964.1|  396|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical pr...    27   7.1  
AY491013-1|AAS18682.1|  464|Caenorhabditis elegans nose resistan...    27   7.1  
AY491012-1|AAS18681.1|  573|Caenorhabditis elegans nose resistan...    27   7.1  
Z93379-10|CAB07594.1|  508|Caenorhabditis elegans Hypothetical p...    27   9.4  
Z92830-17|CAB07364.1|  508|Caenorhabditis elegans Hypothetical p...    27   9.4  
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical
           protein T20H9.6 protein.
          Length = 758

 Score = 31.1 bits (67), Expect = 0.44
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +1

Query: 265 MKRVMNSFVLFKNMLPSYTREELDFPGVKVE 357
           ++ V+N  + FKN+LP+++   LD+ GV ++
Sbjct: 558 LRTVVNEVINFKNLLPAFSANLLDYGGVFIQ 588


>Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical
           protein F35G2.4 protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +1

Query: 202 YVPTALDMYTTCLRDPVFWKIMKRVM---NSFVLFKNMLPSYTREELDFPGVKVERVVSE 372
           +V   ++ Y    R    WK ++ +M    +    KN+  +  R E+ FPG +     + 
Sbjct: 74  FVTNPINAYLLIKRLTTEWKKVENIMLNNKASTFLKNITDNRVRSEVKFPGEEDLSGAAT 133

Query: 373 KMVTFMDEYDLD 408
            ++   D Y LD
Sbjct: 134 ALLRLQDTYSLD 145


>Z79694-7|CAB01964.1|  396|Caenorhabditis elegans Hypothetical
           protein C15A11.7 protein.
          Length = 396

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 279 HDAFHYLPEYW 247
           HD FHY PEYW
Sbjct: 75  HDFFHYYPEYW 85


>Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical
           protein C08F11.2 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +2

Query: 272 AS*TLSCFSKTCCLVILARNLISLVSKLNALYLKRWSPLWMNMTWISRMRFTWTRLRCK 448
           +S + SC      L ++ R +I  + K   +++      W+   +IS   F W  + C+
Sbjct: 110 SSMSFSCMISLQFLSVIQRLVILYLPKFKRVFMGYQLRFWIVGIYISTFHFGWIEINCR 168


>Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical
           protein R07B5.3 protein.
          Length = 326

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 223 MYTTCLRDPVFWKIMKRVMNSFVLFKNMLPSYTREELDFP 342
           +Y  C+   VFW     V++S   F N+       +LDFP
Sbjct: 145 IYQLCILFLVFWGPATYVLSSVSAFPNITSKVVCMQLDFP 184


>AY491013-1|AAS18682.1|  464|Caenorhabditis elegans nose resistant
           to fluoxetine protein.
          Length = 464

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
 Frame = -3

Query: 378 HLFRYNAFNFDTREI-----KFLASITRQHVFEKHERVHDAFHYLPEYWIS*ASSVHIES 214
           H++ Y+  NF  R       K L  +++    + +  V       P   I       ++ 
Sbjct: 229 HIYMYDLGNFKHRYTPSSLPKILQKLSKAVCSKCYVEVSANLTEQPILQIDAHLGARVQL 288

Query: 213 SGNVRVLVHIILIVTQHFSEHCHHMEHFGIVIGHIHATEDKSGKHFHVFGFLQIDHGSIT 34
           SGNV ++ H          E  H + H       +H T   + +H  +FG + + +  + 
Sbjct: 289 SGNVSIMFH--------GREQLHDVLHANT---KLHVTLKPTVRHSRIFGDVSLTNVDVN 337

Query: 33  TFDFAC 16
            FD +C
Sbjct: 338 VFDVSC 343


>AY491012-1|AAS18681.1|  573|Caenorhabditis elegans nose resistant
           to fluoxetine protein.
          Length = 573

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
 Frame = -3

Query: 378 HLFRYNAFNFDTREI-----KFLASITRQHVFEKHERVHDAFHYLPEYWIS*ASSVHIES 214
           H++ Y+  NF  R       K L  +++    + +  V       P   I       ++ 
Sbjct: 338 HIYMYDLGNFKHRYTPSSLPKILQKLSKAVCSKCYVEVSANLTEQPILQIDAHLGARVQL 397

Query: 213 SGNVRVLVHIILIVTQHFSEHCHHMEHFGIVIGHIHATEDKSGKHFHVFGFLQIDHGSIT 34
           SGNV ++ H          E  H + H       +H T   + +H  +FG + + +  + 
Sbjct: 398 SGNVSIMFH--------GREQLHDVLHANT---KLHVTLKPTVRHSRIFGDVSLTNVDVN 446

Query: 33  TFDFAC 16
            FD +C
Sbjct: 447 VFDVSC 452


>Z93379-10|CAB07594.1|  508|Caenorhabditis elegans Hypothetical
           protein F21H7.2 protein.
          Length = 508

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +1

Query: 208 PTALDMYTTCLRDPVFWKIMKRVMNSFVLFKNMLPSYTREELDFPGVKVERVVSEKMVTF 387
           P + D+   C +D  F+   KR+  + +   N LP+   +  D P  K  + VS K+ T 
Sbjct: 408 PYSEDLQAICAKDKEFFSDYKRIWTNTLYNLNPLPT---DAKDRPDPKSTKPVSFKLPTT 464

Query: 388 MDEY 399
              Y
Sbjct: 465 TTVY 468


>Z92830-17|CAB07364.1|  508|Caenorhabditis elegans Hypothetical
           protein F21H7.2 protein.
          Length = 508

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +1

Query: 208 PTALDMYTTCLRDPVFWKIMKRVMNSFVLFKNMLPSYTREELDFPGVKVERVVSEKMVTF 387
           P + D+   C +D  F+   KR+  + +   N LP+   +  D P  K  + VS K+ T 
Sbjct: 408 PYSEDLQAICAKDKEFFSDYKRIWTNTLYNLNPLPT---DAKDRPDPKSTKPVSFKLPTT 464

Query: 388 MDEY 399
              Y
Sbjct: 465 TTVY 468


>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical protein
            ZC53.4 protein.
          Length = 1410

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 126  CQNVPYDDNVQKNAELQSV*YGQVHVRSHCSRYVHYL--LTRSSILE 260
            CQ +P  D   +   L S+  G+  V+S    Y++YL  L R  I E
Sbjct: 1219 CQMLPTGDFKFETQSLISILNGEAEVKSDLKDYINYLKKLDRGCIFE 1265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,950,427
Number of Sequences: 27780
Number of extensions: 255612
Number of successful extensions: 759
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)