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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K04
         (482 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase...    29   1.2  
At1g27680.1 68414.m03383 glucose-1-phosphate adenylyltransferase...    29   1.2  
At4g31680.1 68417.m04498 transcriptional factor B3 family protei...    29   1.6  
At3g58790.1 68416.m06552 glycosyl transferase family 8 protein c...    29   2.2  
At2g21590.1 68415.m02568 glucose-1-phosphate adenylyltransferase...    29   2.2  
At2g01820.1 68415.m00113 leucine-rich repeat protein kinase, put...    28   2.9  
At5g47910.1 68418.m05918 respiratory burst oxidase protein D (Rb...    27   8.8  
At5g27540.1 68418.m03297 GTP-binding protein-related low similar...    27   8.8  
At5g19220.1 68418.m02289 glucose-1-phosphate adenylyltransferase...    27   8.8  
At2g23370.1 68415.m02791 expressed protein                             27   8.8  

>At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase
           large subunit 3 (APL3) / ADP-glucose pyrophosphorylase
           identical to SP|P55231
          Length = 521

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 414 RDIQVIFIHKGDHLFRYNAFNFDTREIKFLASIT 313
           R+I+ I I  GDHL+R N  +F    +   A IT
Sbjct: 206 RNIENIIILSGDHLYRMNYMDFVQHHVDSKADIT 239


>At1g27680.1 68414.m03383 glucose-1-phosphate adenylyltransferase
           large subunit 2 (APL2) / ADP-glucose pyrophosphorylase
           identical to SP|P55230
          Length = 518

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 420 RIRDIQVIFIHKGDHLFRYNAFNFDTREIKFLASIT 313
           + ++++ + I  GDHL+R +  NF  + I+  A IT
Sbjct: 201 KTKNVEHVLILSGDHLYRMDYMNFVQKHIESNADIT 236


>At4g31680.1 68417.m04498 transcriptional factor B3 family protein
           low similarity to reproductive meristem gene 1 [Brassica
           oleracea var. botrytis] GI:3170424; contains Pfam
           profile PF02362: B3 DNA binding domain
          Length = 462

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 420 RIRDIQVIFIHKGDHLFRYNAFNFDTREIKFLASITRQHVFEKHE 286
           RIRD  V+F H+GD +F   A      EI++  SI+ +   E  E
Sbjct: 80  RIRDF-VVFRHEGDMVFHVTALGPSCCEIQYPQSISHEEGEESGE 123


>At3g58790.1 68416.m06552 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8; general stress protein gspA, Bacillus
           subtilis, PIR:S16423
          Length = 540

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = -3

Query: 342 REIKFLASITRQHVFEKHERVHDAFHYLPEYWIS*ASSVHIESSGNVRVLVHIILIVTQH 163
           R+I+  AS+T++ + +   +V  A H+   YW       H+ S G  + L  + L +T+ 
Sbjct: 138 RDIRAFASVTKKMLLQMERKVQSAKHHELVYW-------HLASHGIPKSLHCLSLRLTEE 190

Query: 162 FS 157
           +S
Sbjct: 191 YS 192


>At2g21590.1 68415.m02568 glucose-1-phosphate adenylyltransferase
           large subunit, putative / ADP-glucose pyrophosphorylase,
           putative strong similarity to SP|P55231
          Length = 523

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 414 RDIQVIFIHKGDHLFRYNAFNFDTREIKFLASIT 313
           R+I+ I I  GDHL+R N  +F    +   A IT
Sbjct: 208 RNIENILILSGDHLYRMNYMDFVQSHVDSNADIT 241


>At2g01820.1 68415.m00113 leucine-rich repeat protein kinase,
           putative similar to protein kinase TMK1
           gi|166888|gb|AAA32876; contains Pfam domains PF00560:
           Leucine Rich Repeat and PF00069: Protein kinase domain
          Length = 943

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 237 ASSVHIESSGNVRVLVHIILIVTQHFSE 154
           AS +H+  +GN+ + + ++  VT +FSE
Sbjct: 560 ASDIHVVEAGNLVISIQVLRNVTNNFSE 587


>At5g47910.1 68418.m05918 respiratory burst oxidase protein D
           (RbohD) / NADPH oxidase identical to respiratory burst
           oxidase protein D from Arabidopsis thaliana [gi:3242789]
          Length = 921

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 332 LISLVSKLNALYLKRWSPLWMNMTW--ISRMRFTWTRLRCKEEV*YGL 469
           L+    K+    L  W  LW+ M W  I    FT+  ++ K +  YG+
Sbjct: 359 LVRWSEKIKYFILDNWQRLWIMMLWLGICGGLFTYKFIQYKNKAAYGV 406


>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
           to Mig-2-like GTPase Mtl [Drosophila melanogaster]
           GI:7271872; contains Pfam profile PF00036: EF hand
          Length = 648

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 352 VERVVSEKMVTFMDEYDLDITNALYLDQ--AEMQRRSLIWSTLR 477
           V+RVV EK+   ++E  L +T  L+L     E  R    W+ LR
Sbjct: 243 VKRVVQEKLPEGVNERGLTVTGFLFLHALFIEKGRLETTWTVLR 286


>At5g19220.1 68418.m02289 glucose-1-phosphate adenylyltransferase
           large subunit 1 (APL1) / ADP-glucose pyrophosphorylase
           (ADG2) identical to SP|P55229
          Length = 522

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 435 LVQVKRIRDIQVIFIHKGDHLFRYNAFNF 349
           L +  R +DI+ + I  GDHL+R +  +F
Sbjct: 200 LFEDARSKDIEDVLILSGDHLYRMDYMDF 228


>At2g23370.1 68415.m02791 expressed protein
          Length = 340

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +3

Query: 186 YGQVHVRSHCSRYVHYLLTRSSILEDNETRHELFRAFQKHAA*LYSRG 329
           +G   + ++  +++H +L    + +  E   E+F A  +    LYS+G
Sbjct: 113 HGVWFLANNVDQFIHRILVEEDVSKPEECSQEIFNAAGEAGKKLYSKG 160


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,243,583
Number of Sequences: 28952
Number of extensions: 235381
Number of successful extensions: 674
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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