BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_K04 (482 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase... 29 1.2 At1g27680.1 68414.m03383 glucose-1-phosphate adenylyltransferase... 29 1.2 At4g31680.1 68417.m04498 transcriptional factor B3 family protei... 29 1.6 At3g58790.1 68416.m06552 glycosyl transferase family 8 protein c... 29 2.2 At2g21590.1 68415.m02568 glucose-1-phosphate adenylyltransferase... 29 2.2 At2g01820.1 68415.m00113 leucine-rich repeat protein kinase, put... 28 2.9 At5g47910.1 68418.m05918 respiratory burst oxidase protein D (Rb... 27 8.8 At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 27 8.8 At5g19220.1 68418.m02289 glucose-1-phosphate adenylyltransferase... 27 8.8 At2g23370.1 68415.m02791 expressed protein 27 8.8 >At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase large subunit 3 (APL3) / ADP-glucose pyrophosphorylase identical to SP|P55231 Length = 521 Score = 29.5 bits (63), Expect = 1.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 414 RDIQVIFIHKGDHLFRYNAFNFDTREIKFLASIT 313 R+I+ I I GDHL+R N +F + A IT Sbjct: 206 RNIENIIILSGDHLYRMNYMDFVQHHVDSKADIT 239 >At1g27680.1 68414.m03383 glucose-1-phosphate adenylyltransferase large subunit 2 (APL2) / ADP-glucose pyrophosphorylase identical to SP|P55230 Length = 518 Score = 29.5 bits (63), Expect = 1.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 420 RIRDIQVIFIHKGDHLFRYNAFNFDTREIKFLASIT 313 + ++++ + I GDHL+R + NF + I+ A IT Sbjct: 201 KTKNVEHVLILSGDHLYRMDYMNFVQKHIESNADIT 236 >At4g31680.1 68417.m04498 transcriptional factor B3 family protein low similarity to reproductive meristem gene 1 [Brassica oleracea var. botrytis] GI:3170424; contains Pfam profile PF02362: B3 DNA binding domain Length = 462 Score = 29.1 bits (62), Expect = 1.6 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -3 Query: 420 RIRDIQVIFIHKGDHLFRYNAFNFDTREIKFLASITRQHVFEKHE 286 RIRD V+F H+GD +F A EI++ SI+ + E E Sbjct: 80 RIRDF-VVFRHEGDMVFHVTALGPSCCEIQYPQSISHEEGEESGE 123 >At3g58790.1 68416.m06552 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8; general stress protein gspA, Bacillus subtilis, PIR:S16423 Length = 540 Score = 28.7 bits (61), Expect = 2.2 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = -3 Query: 342 REIKFLASITRQHVFEKHERVHDAFHYLPEYWIS*ASSVHIESSGNVRVLVHIILIVTQH 163 R+I+ AS+T++ + + +V A H+ YW H+ S G + L + L +T+ Sbjct: 138 RDIRAFASVTKKMLLQMERKVQSAKHHELVYW-------HLASHGIPKSLHCLSLRLTEE 190 Query: 162 FS 157 +S Sbjct: 191 YS 192 >At2g21590.1 68415.m02568 glucose-1-phosphate adenylyltransferase large subunit, putative / ADP-glucose pyrophosphorylase, putative strong similarity to SP|P55231 Length = 523 Score = 28.7 bits (61), Expect = 2.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 414 RDIQVIFIHKGDHLFRYNAFNFDTREIKFLASIT 313 R+I+ I I GDHL+R N +F + A IT Sbjct: 208 RNIENILILSGDHLYRMNYMDFVQSHVDSNADIT 241 >At2g01820.1 68415.m00113 leucine-rich repeat protein kinase, putative similar to protein kinase TMK1 gi|166888|gb|AAA32876; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain Length = 943 Score = 28.3 bits (60), Expect = 2.9 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -3 Query: 237 ASSVHIESSGNVRVLVHIILIVTQHFSE 154 AS +H+ +GN+ + + ++ VT +FSE Sbjct: 560 ASDIHVVEAGNLVISIQVLRNVTNNFSE 587 >At5g47910.1 68418.m05918 respiratory burst oxidase protein D (RbohD) / NADPH oxidase identical to respiratory burst oxidase protein D from Arabidopsis thaliana [gi:3242789] Length = 921 Score = 26.6 bits (56), Expect = 8.8 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +2 Query: 332 LISLVSKLNALYLKRWSPLWMNMTW--ISRMRFTWTRLRCKEEV*YGL 469 L+ K+ L W LW+ M W I FT+ ++ K + YG+ Sbjct: 359 LVRWSEKIKYFILDNWQRLWIMMLWLGICGGLFTYKFIQYKNKAAYGV 406 >At5g27540.1 68418.m03297 GTP-binding protein-related low similarity to Mig-2-like GTPase Mtl [Drosophila melanogaster] GI:7271872; contains Pfam profile PF00036: EF hand Length = 648 Score = 26.6 bits (56), Expect = 8.8 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +1 Query: 352 VERVVSEKMVTFMDEYDLDITNALYLDQ--AEMQRRSLIWSTLR 477 V+RVV EK+ ++E L +T L+L E R W+ LR Sbjct: 243 VKRVVQEKLPEGVNERGLTVTGFLFLHALFIEKGRLETTWTVLR 286 >At5g19220.1 68418.m02289 glucose-1-phosphate adenylyltransferase large subunit 1 (APL1) / ADP-glucose pyrophosphorylase (ADG2) identical to SP|P55229 Length = 522 Score = 26.6 bits (56), Expect = 8.8 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -3 Query: 435 LVQVKRIRDIQVIFIHKGDHLFRYNAFNF 349 L + R +DI+ + I GDHL+R + +F Sbjct: 200 LFEDARSKDIEDVLILSGDHLYRMDYMDF 228 >At2g23370.1 68415.m02791 expressed protein Length = 340 Score = 26.6 bits (56), Expect = 8.8 Identities = 11/48 (22%), Positives = 24/48 (50%) Frame = +3 Query: 186 YGQVHVRSHCSRYVHYLLTRSSILEDNETRHELFRAFQKHAA*LYSRG 329 +G + ++ +++H +L + + E E+F A + LYS+G Sbjct: 113 HGVWFLANNVDQFIHRILVEEDVSKPEECSQEIFNAAGEAGKKLYSKG 160 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,243,583 Number of Sequences: 28952 Number of extensions: 235381 Number of successful extensions: 674 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 663 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 674 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 829097472 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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