Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_K03
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   0.77 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 407 SVCNGPETFSVCCGPPP--EINPEDMTLNE 490
           +VC     +S+ CG PP  ++NP++  + E
Sbjct: 349 AVCVNERPWSLYCGEPPCGQLNPDNPNVYE 378


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 323 CVGLYNCEHITYMMLDKTRKSKM 391
           C  LYNC H T +++  +R  ++
Sbjct: 142 CQFLYNCFHSTLLLMILSRYQRL 164


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 52  NDYFFYSFIYSINISKFDSCTDLYN 126
           N  F + FI    +S F+SCT L N
Sbjct: 390 NFMFSFGFILLRFLSVFESCTRLNN 414


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 335 YNCEHITYMMLDKTRKSKMDYVRQSVC 415
           Y C      ++DK ++++  Y R   C
Sbjct: 120 YACREEKNCIIDKRQRNRCQYCRYQKC 146


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 440 CCGPPPEINP 469
           C GPPP+  P
Sbjct: 173 CMGPPPQPEP 182


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 96  TDINRIYETVEKII 55
           T++ R Y+ VEKI+
Sbjct: 65  TNLKRFYKVVEKIL 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,784
Number of Sequences: 336
Number of extensions: 2848
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)