Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J23
(472 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 129 3e-29
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 101 1e-20
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 97 2e-19
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 95 5e-19
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 84 1e-15
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 79 4e-14
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 78 1e-13
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 73 3e-12
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 71 2e-11
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 69 5e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 69 5e-11
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 69 7e-11
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 69 7e-11
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 67 2e-10
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 64 1e-09
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 60 2e-08
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 55 7e-07
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 43 0.004
UniRef50_A0CQ05 Cluster: Chromosome undetermined scaffold_237, w... 35 1.0
UniRef50_Q739I7 Cluster: Aldehyde dehydrogenase; n=3; Bacillacea... 34 1.4
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 3.2
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 4.2
UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_UPI00015B9224 Cluster: UPI00015B9224 related cluster; n... 32 7.3
UniRef50_A6RPU8 Cluster: Putative uncharacterized protein; n=2; ... 31 9.7
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 129 bits (312), Expect = 3e-29
Identities = 64/114 (56%), Positives = 78/114 (68%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP+SL
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
SR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AG
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAG 117
Score = 58.4 bits (135), Expect = 7e-08
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ILTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 118 GKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 101 bits (241), Expect = 1e-20
Identities = 51/108 (47%), Positives = 71/108 (65%)
Frame = +2
Query: 20 DRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARH 199
++K +RT KS D+ T++ FN +IL+RLFMS++NRPP+SLSRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 200 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
M+ +EG I VVVG V++D+R+Y VP + V AL TE ARARI AG
Sbjct: 68 MQ--GKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAG 113
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
GE LTFDQLALR P TVL++G +NAREAV+HFGPAPG P
Sbjct: 114 GECLTFDQLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVP 154
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 96.7 bits (230), Expect = 2e-19
Identities = 45/79 (56%), Positives = 61/79 (77%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
TNAKFN I+L+RLFMSR N+ +SL+R+ R M K REG AVVVG +++DVR++ +PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 287 TVAALHVTEKARARILAAG 343
+ AL VT +ARARI+ AG
Sbjct: 69 KICALRVTARARARIIKAG 87
Score = 41.5 bits (93), Expect = 0.009
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVR 443
GEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 88 GEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 95.5 bits (227), Expect = 5e-19
Identities = 48/110 (43%), Positives = 68/110 (61%)
Frame = +2
Query: 14 KHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLA 193
+H R RT KS +V T+A FN+++L+ LF+S+INRPP+S+SR+A
Sbjct: 9 QHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIA 68
Query: 194 RHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
R +K+ VVVGTV++D R++ PK TVAAL T ARA+I+ AG
Sbjct: 69 RALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAG 118
Score = 57.6 bits (133), Expect = 1e-07
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAP 461
GE +T DQLA+RAP G+ T++++G RN+REAVRHFG P
Sbjct: 119 GECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGP 157
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 84.2 bits (199), Expect = 1e-15
Identities = 43/79 (54%), Positives = 59/79 (74%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+ FN+++L+RL M R + P+SLS+L++HM+K R AVVVGTV+ND R+ VPK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 287 TVAALHVTEKARARILAAG 343
+V AL VTE AR RILA+G
Sbjct: 98 SVCALRVTETARKRILASG 116
Score = 50.4 bits (115), Expect = 2e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 449
GE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 117 GEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF 151
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 79.4 bits (187), Expect = 4e-14
Identities = 46/107 (42%), Positives = 61/107 (57%)
Frame = +2
Query: 23 RKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARHM 202
RKV R E KS + T F +++ +RL +S+ NRP +S+SRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 203 KKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
K RE IAVV TV+ND RL T+P+MT+ AL + AR+RI AG
Sbjct: 72 HK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAG 116
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G ++FD+L PTG VL+QGRR+ R + FG +PG P
Sbjct: 117 GRCMSFDELLAEKPTGDNCVLLQGRRSCRAVCKKFG-SPGRP 157
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 77.8 bits (183), Expect = 1e-13
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+++FN +LRRL +R R PIS+SRL + + + VVVGTV++D RL TVPK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 287 TVAALHVTEKARARILAAG 343
V AL TE AR RILAAG
Sbjct: 315 NVCALRFTETARKRILAAG 333
Score = 48.8 bits (111), Expect = 6e-05
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ LTFDQLA + PTG T+L++G + REA++HFG A G P
Sbjct: 334 GKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFGRAAGLP 374
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 72.9 bits (171), Expect = 3e-12
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+ FN+II +RL M + RPP+SLS+L +HM + +AVVVG++++D RL++ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 287 TVAALHVTEKARARILAAG 343
V AL TE AR RI+ AG
Sbjct: 154 KVCALRFTETARKRIVDAG 172
Score = 58.4 bits (135), Expect = 7e-08
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
GE LTFDQLALR PTG+ +L++G AR A +HFG APG P
Sbjct: 173 GECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGRP 214
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FN+++L+RLFMSR NRPP++L
Sbjct: 113 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLAL 172
Query: 182 SRL 190
SR+
Sbjct: 173 SRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 68.9 bits (161), Expect = 5e-11
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +2
Query: 23 RKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARHM 202
+K + T KS D+ T +KFN + L+R FMS++N+ P+ LSRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 203 KKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 331
++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 68.9 bits (161), Expect = 5e-11
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +2
Query: 23 RKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARHM 202
+K + T KS D+ T +KFN + L+R FMS++N+ P+ LSRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 203 KKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 331
++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 68.5 bits (160), Expect = 7e-11
Identities = 40/79 (50%), Positives = 51/79 (64%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T++ FN +LRRL +R R PIS+SRL + + + VVVGTV++DVRL TVPK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 287 TVAALHVTEKARARILAAG 343
V TE AR RILAAG
Sbjct: 395 KV----FTETARKRILAAG 409
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ LTFDQLA + PTG T+L++G R RE ++HFG A G P
Sbjct: 410 GKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFGRAAGLP 450
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 68.5 bits (160), Expect = 7e-11
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKP------TREGLIAVVVGTVSNDVRL 268
T++ FN+++ +RL SR NR PISLSR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 269 YTVPKMTVAALHVTEKARARILAAG 343
+P M V AL ++ AR I+AAG
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAG 124
Score = 58.8 bits (136), Expect = 6e-08
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
GE LTFDQLA+ APTG+ T L++GR++ RE+VRHFG A G P
Sbjct: 125 GECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHFG-ASGVP 165
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 66.9 bits (156), Expect = 2e-10
Identities = 45/114 (39%), Positives = 57/114 (50%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
D++ H RK + + T +KF + IL RL +SR+NRP +S
Sbjct: 4 DLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVST 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
S+LA MKK E AV V TV+ D R Y VPKM V AL T+ A A I AG
Sbjct: 64 SKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAG 114
Score = 61.3 bits (142), Expect = 1e-08
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFG 452
G+ L FD+LAL+APTGRKTVL++G+RN REA++HFG
Sbjct: 115 GKCLRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 64.5 bits (150), Expect = 1e-09
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 161 NRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 340
N+PP+SLSR+ MK P +E AVVVGT+++DV + VPK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 341 G 343
G
Sbjct: 153 G 153
Score = 42.7 bits (96), Expect = 0.004
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ LTFDQLAL +P TVL+ G R RE HF A G P
Sbjct: 154 GKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTP 195
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 60.1 bits (139), Expect = 2e-08
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +2
Query: 167 PPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 340
PP+ LSR+ R MK E A V+GTV++++R+ VPK+ V+AL VT AR+RIL A
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKA 104
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 55.2 bits (127), Expect = 7e-07
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+ FN+I+L+RL M R + P+SLS+L++HM+ +R AVV+GTV++ L +P
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 287 TVAALHVT 310
TV + VT
Sbjct: 98 TVTLVLVT 105
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 449
GE+LTFDQL R+P G K L++G AREAV+HF
Sbjct: 155 GEVLTFDQLVARSPIGGKCTLLRGETKAREAVKHF 189
Score = 38.3 bits (85), Expect = 0.084
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2
Query: 254 NDVRLYTVPKMTVAALHVTEKARARILAAG 343
+D R+ VPK++V AL VTE AR RILA+G
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASG 154
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = +2
Query: 116 KFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVA 295
KF + ++RR SR +R ISLS+L + K T + ++ V + ND R+ PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSIL--TVSKILNDERISKTPKLKIF 124
Query: 296 ALHVTEKARARILAAG 343
AL+ + + +I+ G
Sbjct: 125 ALNFSSSVKKKIIENG 140
>UniRef50_A0CQ05 Cluster: Chromosome undetermined scaffold_237,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 978
Score = 34.7 bits (76), Expect = 1.0
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -3
Query: 470 RCTRRRPEVTNCLTSITATLN-QYCLTSS 387
RC ++ P + NC+TS+T N + CLTSS
Sbjct: 728 RCIKKAPSIKNCVTSVTKISNIEICLTSS 756
>UniRef50_Q739I7 Cluster: Aldehyde dehydrogenase; n=3;
Bacillaceae|Rep: Aldehyde dehydrogenase - Bacillus
cereus (strain ATCC 10987)
Length = 489
Score = 34.3 bits (75), Expect = 1.4
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 432 HEHYGDPEPVLSYVQWAHGGLTGQTLESHLPAAKMRARAFSVTCSAATVILGTV*SLTSL 253
HEHY D +SY ++A G+T + +LP +M +A + S TV++ S T L
Sbjct: 135 HEHY-DKHNFMSYAKYAPAGVTSLIIPWNLPFMQMTWKASAALASGNTVVVKPA-SYTPL 192
Query: 252 ETV 244
V
Sbjct: 193 SAV 195
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 33.1 bits (72), Expect = 3.2
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 188 LARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAAL 301
+ + MK P E AVVVG V++DVR+ V ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 4.2
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +2
Query: 116 KFNQIILRRLFMSRINRPPI--SLSRLARHMKKPTRE------GLIAVVVGTVSNDVRLY 271
+F ++I L++S RP I S+ LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTAG--LGIV 1301
Query: 272 TVPKMTVAALH 304
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2471
Score = 32.7 bits (71), Expect = 4.2
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 212 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARIL 334
TRE + A VV + + Y VPK T+A+ TEKA ++L
Sbjct: 442 TREDISAAVVVCRDDQLMAYCVPKATIASAGKTEKALDQVL 482
>UniRef50_UPI00015B9224 Cluster: UPI00015B9224 related cluster; n=1;
unknown|Rep: UPI00015B9224 UniRef100 entry - unknown
Length = 735
Score = 31.9 bits (69), Expect = 7.3
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -1
Query: 469 GAPGAGPK*RTA---SRALRRP*TSTVLRPVGARRANWSNVRI-SPSSSQDAGT 320
GA GP RT L +P + RPVGARR NW+ I + SS+ D+G+
Sbjct: 620 GARRRGPSRRTVLVRHARLPQPLPRRLHRPVGARRNNWARPGIGARSSAPDSGS 673
>UniRef50_A6RPU8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 637
Score = 31.5 bits (68), Expect = 9.7
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = -1
Query: 397 LRPVGARRANWSNVRISPSSSQDAGTSFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTL 218
L+ + A+ NW V + SS+ + T+ +++ H + + GD + D L
Sbjct: 190 LQELRAQVPNWKPVGYNRSST-NGHTNDIASKRRRLSHSGGATNGYDFGDDESSKLDGNL 248
Query: 217 ACRLLHVACQTGQRNRRSVDTAHKQ 143
R+ H C RNRR V+ A+ +
Sbjct: 249 VLRINHEKCTVFMRNRRLVELANSR 273
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,919,108
Number of Sequences: 1657284
Number of extensions: 8874580
Number of successful extensions: 23054
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23033
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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