Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J23
(472 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 130 3e-30
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 130 3e-30
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 130 3e-30
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 130 3e-30
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 128 1e-29
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 106 3e-23
BC114520-1|AAI14521.1| 738|Homo sapiens PTGFRN protein protein. 29 6.1
BC098142-1|AAH98142.1| 788|Homo sapiens PTGFRN protein protein. 29 6.1
AL445231-2|CAH71960.1| 879|Homo sapiens prostaglandin F2 recept... 29 6.1
AL157904-1|CAI22650.1| 879|Homo sapiens prostaglandin F2 recept... 29 6.1
AK074637-1|BAC11104.1| 863|Homo sapiens protein ( Homo sapiens ... 29 6.1
AB037857-1|BAA92674.1| 924|Homo sapiens KIAA1436 protein protein. 29 6.1
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 3e-30
Identities = 64/114 (56%), Positives = 78/114 (68%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP+SL
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
SR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AG
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAG 117
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ILTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 118 GKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 3e-30
Identities = 64/114 (56%), Positives = 78/114 (68%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP+SL
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
SR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AG
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAG 117
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ILTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 118 GKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 3e-30
Identities = 64/114 (56%), Positives = 78/114 (68%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP+SL
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
SR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AG
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAG 117
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ILTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 118 GKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 3e-30
Identities = 64/114 (56%), Positives = 78/114 (68%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP+SL
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
SR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AG
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAG 117
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ILTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 118 GKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 128 bits (308), Expect = 1e-29
Identities = 63/114 (55%), Positives = 77/114 (67%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP+ L
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLCL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
SR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AG
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAG 117
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ILTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 118 GKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 106 bits (255), Expect = 3e-23
Identities = 50/79 (63%), Positives = 63/79 (79%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
TN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75
Query: 287 TVAALHVTEKARARILAAG 343
V AL VT +AR+RIL AG
Sbjct: 76 KVCALRVTSRARSRILRAG 94
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
G+ILTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 95 GKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 136
>BC114520-1|AAI14521.1| 738|Homo sapiens PTGFRN protein protein.
Length = 738
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 471 EVHQAPARSDELPHEHYGDPEPVLSYVQWAHGG 373
EVH+ PAR L H G P L Y Q H G
Sbjct: 45 EVHRGPARRSVLALTHEGRFHPGLGYEQRYHSG 77
>BC098142-1|AAH98142.1| 788|Homo sapiens PTGFRN protein protein.
Length = 788
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 471 EVHQAPARSDELPHEHYGDPEPVLSYVQWAHGG 373
EVH+ PAR L H G P L Y Q H G
Sbjct: 95 EVHRGPARRSVLALTHEGRFHPGLGYEQRYHSG 127
>AL445231-2|CAH71960.1| 879|Homo sapiens prostaglandin F2 receptor
negative regulator protein.
Length = 879
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 471 EVHQAPARSDELPHEHYGDPEPVLSYVQWAHGG 373
EVH+ PAR L H G P L Y Q H G
Sbjct: 186 EVHRGPARRSVLALTHEGRFHPGLGYEQRYHSG 218
>AL157904-1|CAI22650.1| 879|Homo sapiens prostaglandin F2 receptor
negative regulator protein.
Length = 879
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 471 EVHQAPARSDELPHEHYGDPEPVLSYVQWAHGG 373
EVH+ PAR L H G P L Y Q H G
Sbjct: 186 EVHRGPARRSVLALTHEGRFHPGLGYEQRYHSG 218
>AK074637-1|BAC11104.1| 863|Homo sapiens protein ( Homo sapiens
cDNA FLJ90156 fis, clone HEMBB1002245, highly similar to
PROSTAGLANDIN F2-ALPHA RECEPTOR REGULATORY PROTEIN
PRECURSOR. ).
Length = 863
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 471 EVHQAPARSDELPHEHYGDPEPVLSYVQWAHGG 373
EVH+ PAR L H G P L Y Q H G
Sbjct: 186 EVHRGPARRSVLALTHEGRFHPGLGYEQRYHSG 218
>AB037857-1|BAA92674.1| 924|Homo sapiens KIAA1436 protein protein.
Length = 924
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 471 EVHQAPARSDELPHEHYGDPEPVLSYVQWAHGG 373
EVH+ PAR L H G P L Y Q H G
Sbjct: 231 EVHRGPARRSVLALTHEGRFHPGLGYEQRYHSG 263
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,749,544
Number of Sequences: 237096
Number of extensions: 1432519
Number of successful extensions: 2686
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2686
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -