Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J23
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical ... 120 4e-28
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.3
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 29 2.2
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 29 2.2
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 29 2.2
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 29 2.2
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z49128-4|CAA88954.1| 541|Caenorhabditis elegans Hypothetical pr... 27 5.1
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 27 6.8
Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical
protein Y45F10D.12 protein.
Length = 188
Score = 120 bits (290), Expect = 4e-28
Identities = 62/114 (54%), Positives = 76/114 (66%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DINHKHDR RRT KS++ T KFN I+L+RL MSR NR P+SL
Sbjct: 4 DINHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPLSL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
++LAR ++K E V + TV++D RLYTVPK++VAALHVTE ARARILAAG
Sbjct: 64 AKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAG 117
Score = 66.1 bits (154), Expect = 1e-11
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +3
Query: 345 GEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 470
GEI+T DQLAL++P G TV +QG R+AREA +HFGPAPG P
Sbjct: 118 GEIITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVP 159
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 306 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMWRAKRDKEI 172
T S +TV +G+ + TS ++ TT+A KPS FM+ + KEI
Sbjct: 615 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMYDT-QSKEI 658
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 306 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMWRAKRDKEI 172
T S +TV +G+ + TS ++ TT+A KPS FM+ + KEI
Sbjct: 822 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMYDT-QSKEI 865
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 215 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGR*DSNV 361
R+G IAV + + ++ K V LH+ EKA + +G DSNV
Sbjct: 95 RDGTIAVFGPSQAEPYAIFNEHKQNVCCLHINEKATH--MLSGSWDSNV 141
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 215 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGR*DSNV 361
R+G IAV + + ++ K V LH+ EKA + +G DSNV
Sbjct: 95 RDGTIAVFGPSQAEPYAIFNEHKQNVCCLHINEKATH--MLSGSWDSNV 141
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 215 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGR*DSNV 361
R+G IAV + + ++ K V LH+ EKA + +G DSNV
Sbjct: 95 RDGTIAVFGPSQAEPYAIFNEHKQNVCCLHINEKATH--MLSGSWDSNV 141
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 215 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGR*DSNV 361
R+G IAV + + ++ K V LH+ EKA + +G DSNV
Sbjct: 95 RDGTIAVFGPSQAEPYAIFNEHKQNVCCLHINEKATH--MLSGSWDSNV 141
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 319 SFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLAC-RLLHVACQTGQRNRRSVDTA 152
S+L+N G+C NSV P +D S Q AC + V+C G R +A
Sbjct: 933 SYLANAFQGFCCTANSVCPDNADYLIDDQSQQPRACTQGTFVSCPNGYACRSLTSSA 989
>Z49128-4|CAA88954.1| 541|Caenorhabditis elegans Hypothetical
protein M03C11.4 protein.
Length = 541
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 471 EVHQAPARSDELPHEHYGDPEPVLSY 394
E+ AP E+ ++H+GD E + Y
Sbjct: 163 EISTAPRYEPEMVYQHFGDEETIFGY 188
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 106 HECQVQPDHPTEIVYE 153
HECQVQ D PT ++ E
Sbjct: 575 HECQVQNDEPTALLRE 590
>Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical
protein T01H3.2 protein.
Length = 980
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +3
Query: 117 SSTRSSYGDCL*AVSTD 167
SSTR+S+GDC+ ++S++
Sbjct: 569 SSTRNSFGDCMWSISSE 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,664,671
Number of Sequences: 27780
Number of extensions: 210313
Number of successful extensions: 582
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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