Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J22
(440 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 33 0.10
04_04_0364 + 24726020-24726255,24726330-24726467,24727191-247276... 31 0.54
03_02_0258 + 6915645-6915785,6915950-6916020,6916157-6916337,691... 31 0.54
10_08_0846 + 21001125-21001235,21001492-21001580,21001715-210018... 29 1.3
06_01_0909 - 7011253-7012385,7014966-7015221 29 1.3
10_02_0095 + 5243703-5243965,5244061-5244173,5244432-5244481,524... 29 1.7
11_01_0306 + 2301575-2302480 28 2.9
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 28 2.9
02_02_0637 - 12491706-12492575,12492580-12492657 28 2.9
09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,598... 28 3.8
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 28 3.8
03_05_0227 + 22133847-22133951,22134648-22135047,22135452-221355... 28 3.8
12_01_0307 - 2312816-2313133,2313920-2313967,2314337-2314393,231... 27 5.1
10_01_0171 + 1917520-1918056,1919201-1919336,1921873-1922060,192... 27 5.1
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 5.1
05_04_0231 + 19254766-19255153,19255245-19255480,19256609-192566... 27 5.1
01_01_1129 - 8948612-8950117,8951354-8951503 27 5.1
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 27 6.7
09_04_0659 + 19282366-19282584,19282668-19282759,19282868-192829... 27 6.7
05_06_0105 + 25607374-25607673,25608319-25608377,25608761-256089... 27 6.7
05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 27 6.7
04_04_1542 - 34264994-34265331,34266195-34267029 27 6.7
04_03_0703 - 18870287-18871351,18871542-18871733 27 6.7
04_01_0362 - 4742441-4743840,4743854-4744127 27 6.7
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 27 6.7
10_07_0100 + 12861588-12862601 27 8.8
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652... 27 8.8
04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061 27 8.8
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 27 8.8
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 33.1 bits (72), Expect = 0.10
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 319 PRPLPWTLHRHRRREGL*PEPLWTTVCPPTTVGRHSLLL---HKAAASSGRGVAQP 161
P PLP LHR RRR L P P T RHS LL ++ + S RG QP
Sbjct: 18 PLPLPPLLHR-RRRVVLNPSPRTLTTRAEALFSRHSHLLPADDRSPSPSTRGSVQP 72
>04_04_0364 +
24726020-24726255,24726330-24726467,24727191-24727657,
24727753-24728300
Length = 462
Score = 30.7 bits (66), Expect = 0.54
Identities = 26/90 (28%), Positives = 31/90 (34%)
Frame = -1
Query: 425 CSNISDSCRHRSRQSNIDGLMNTAWNLVCLEHAGCXXXXXXXXXXXXXPRGSVTRAPLDH 246
CS S SCR R L + + C +H C VTRA DH
Sbjct: 37 CSRWSPSCRDAFRTIQPARLAASRTHPPCTDHTSCNKQQLLYISSEVRVLDRVTRAH-DH 95
Query: 245 SLSPDHGWTSLPTSAQGSSLQRPRCSAALC 156
L H +LP S G + R LC
Sbjct: 96 GLGEVH---ALPGSCGGGARWRGCTGGLLC 122
>03_02_0258 +
6915645-6915785,6915950-6916020,6916157-6916337,
6916461-6916643,6916753-6916884,6916986-6917084,
6917381-6917593,6917746-6917858,6917959-6918073
Length = 415
Score = 30.7 bits (66), Expect = 0.54
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 336 GTCGLRRDRCRGRYIDTGAERVCNPSPSGPQFV 238
G+ L R R + GAER+C PSPS QFV
Sbjct: 147 GSYMLFRPEENARRMQHGAERMCMPSPSVEQFV 179
>10_08_0846 +
21001125-21001235,21001492-21001580,21001715-21001871,
21002076-21002186,21002282-21002413,21002686-21002784,
21003193-21003309,21004411-21004506,21004919-21005031,
21005589-21005709
Length = 381
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -3
Query: 288 TGAERVCNPSPSGPQFV 238
TGAER+C P+PS QFV
Sbjct: 127 TGAERMCMPAPSVEQFV 143
>06_01_0909 - 7011253-7012385,7014966-7015221
Length = 462
Score = 29.5 bits (63), Expect = 1.3
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 269 VTRAPLDHSLSPDHGWTSLPT-SAQGSSLQRPRCSAALCGTSQSAPESSWLT*RPNSPAH 93
V+ P + + GWT L T +A+G+ +R + C TS W+ P+ PA+
Sbjct: 61 VSHTPPPAAATTRLGWTMLGTFTARGAVQKRAEENNNSCDTSVGR----WVR-DPSGPAY 115
Query: 92 TNATCCAAP 66
T ATC P
Sbjct: 116 TAATCPTLP 124
>10_02_0095 +
5243703-5243965,5244061-5244173,5244432-5244481,
5244629-5244862,5245394-5245543,5245816-5245836,
5245920-5246087
Length = 332
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 51 VLRCVRSSAAGGIRMGGTVRPLRQPAALRGAL*RTAQGCATPR 179
+L ++AAGG+R GG V R A+ A T G A P+
Sbjct: 4 ILARAGATAAGGLRSGGDVPRRRNMVAIVAATTTTGAGPAVPK 46
>11_01_0306 + 2301575-2302480
Length = 301
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 24 TMLFCTVVFVLRCVRSSAAGGIRMGGTVRPLRQ---PAALRGAL*RTAQGC 167
T+L + +LR R++AAGG GG R RQ AA AL + GC
Sbjct: 178 TILIQRLGELLRAYRANAAGGANGGGAPRSGRQRPASAAAVAALEKRKHGC 228
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 273 VCNPSPSGPQFVPRPRLDVTPYFCTRQQPP 184
+C P PS P F P PR TP PP
Sbjct: 276 ICRPPPSPPYFAPPPR--ATPTVSLAGPPP 303
>02_02_0637 - 12491706-12492575,12492580-12492657
Length = 315
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -1
Query: 215 LPTSAQGSSLQRPRCSAALCGTSQSAPESSWLT*RPNSPAHTNAT 81
LPTSA CS G S S P SSW+ SP + T
Sbjct: 68 LPTSALLILYNLLLCSTCRAGCSASPPASSWICGTEGSPPTRSRT 112
>09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,
5988427-5989228,5990966-5991016,5992391-5993464,
5994458-5994706
Length = 1666
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 42 VVFVLRCVRSSAAGGIRMGGTVRPLRQPAAL 134
V L C+R +A + +GG +RP R P +
Sbjct: 1062 VASFLDCIRLTAGPLLALGGAIRPARMPVTV 1092
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 176 SAAGGCCLVQK*GVTSNRGRGTNCGPEGLGLQTLSA 283
SAAGGC L ++ ++ R R +CG L ++LS+
Sbjct: 316 SAAGGCDLQRENAISGERRRAADCGWGILTNESLSS 351
>03_05_0227 +
22133847-22133951,22134648-22135047,22135452-22135561,
22135869-22135955
Length = 233
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 275 GSVTRAPLDHSLSPDHGWTSLPTSAQGSSLQRPRC 171
GS+ R D ++PD G SL +Q S+ RC
Sbjct: 36 GSIARPRADTRVAPDQGRISLTAPSQHDSMDTFRC 70
>12_01_0307 -
2312816-2313133,2313920-2313967,2314337-2314393,
2315749-2315822,2316116-2316285,2316415-2316509
Length = 253
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -3
Query: 330 CGLRRDRCRGRYIDTGAERVCNPSPSGPQFVPRPRLDVTPYFCTRQQPPAAE 175
C L RC G + GA +C + + RL +T + T +P A E
Sbjct: 56 CLLGAPRCHGIGMLVGAFSICKEQEQVREAILEERLMLTAFLLTYSEPHAGE 107
>10_01_0171 +
1917520-1918056,1919201-1919336,1921873-1922060,
1922491-1922694,1923913-1924425
Length = 525
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -2
Query: 337 WNMRAAPRPLPWTLH---RHRRREGL*PEPLW 251
W A R P+ + R RRR+GL PE LW
Sbjct: 152 WRPWAEERQAPFVVELASRSRRRDGLSPEALW 183
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 27.5 bits (58), Expect = 5.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 365 MNTAWNLVCLEHAGC 321
+N W L+C+EHA C
Sbjct: 466 VNLCWKLICMEHAVC 480
>05_04_0231 +
19254766-19255153,19255245-19255480,19256609-19256632,
19257612-19258009,19258109-19258241,19258399-19258488,
19258613-19258843
Length = 499
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 322 APRPLPWTLHRHRRREGL*PEPLWTTVCPPTTVGRHSLLL 203
AP P P LH H RR G P PL+ T+ P + + +LL
Sbjct: 35 APWPAPGQLH-HNRRGGGHPNPLF-TILPASALAIGVVLL 72
>01_01_1129 - 8948612-8950117,8951354-8951503
Length = 551
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 227 GWTSLPTSAQGSSLQRPRCSAALCGTSQSAPESSWLT*RPNSPAHTNATCCAAP 66
GW ++P G+S+ + C TS SAP W+ NSP A+ +AP
Sbjct: 359 GWNNVPMMVPGTSMPESASQSESCSTS-SAP---WM--NMNSPMMPVASRLSAP 406
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 267 NPSPSGPQFVPRPRLDVTPY 208
NP PS P+ VP P ++TPY
Sbjct: 495 NPYPSPPEIVPSPP-EITPY 513
>09_04_0659 +
19282366-19282584,19282668-19282759,19282868-19282958,
19283393-19283512,19283638-19283730,19283795-19283933,
19284060-19284141,19284229-19284361,19285024-19286010
Length = 651
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 337 WNMRAAPRPLPWTLHRHRRREGL*PEPLWTTVCP 236
W + AA RPL ++ + + REG EP+ T+ P
Sbjct: 478 WLVFAAHRPLGYSSNEYYAREGSFSEPMGRTLQP 511
>05_06_0105 +
25607374-25607673,25608319-25608377,25608761-25608917,
25609157-25609461,25609866-25609986,25610334-25610422,
25610491-25610569
Length = 369
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 273 PSRRRCLCSVHGNGRGAARMFQAHEIPR--SVHQPV 374
P+ +CS G+ G+AR+FQ H R S QP+
Sbjct: 52 PAIDALVCSGRGSAGGSARLFQRHAARRRISTFQPL 87
>05_01_0397 -
3129679-3130144,3130655-3131104,3132215-3132273,
3133136-3133305,3134655-3134771,3134980-3135166
Length = 482
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 226 VGRHSLLLHKAAASSGRGVAQPC 158
+G+H H AA SS G A PC
Sbjct: 196 MGQHMFTEHVAAVSSAPGAAHPC 218
>04_04_1542 - 34264994-34265331,34266195-34267029
Length = 390
Score = 27.1 bits (57), Expect = 6.7
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 325 AAPRPLPWTLHRHRRREGL*PEPLWTTVCPPTTVGRHSLLLHKAAASSGRGVA 167
+AP P WT+ RH R++ P T + P +L +AA G +A
Sbjct: 166 SAPLPSYWTMERHERKDCNLP----TNLAPEVYDALSEVLSRRAARRGGATIA 214
>04_03_0703 - 18870287-18871351,18871542-18871733
Length = 418
Score = 27.1 bits (57), Expect = 6.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 212 PTSAQGSSLQRPRCSAALCGTSQS 141
P++ +S+ R RC + CGT +S
Sbjct: 246 PSTGSSTSMSRARCCGSACGTRRS 269
>04_01_0362 - 4742441-4743840,4743854-4744127
Length = 557
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 283 RREGL*PEPLWTTVCPPTTVGRHSLLLHKA 194
RR P+ T++ PP+T+G +L LH A
Sbjct: 376 RRARFGPKSTVTSLAPPSTIGGSALALHYA 405
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 132 EQLADVAAEQSRPYECHLLRCSVHIVVQIRLCK 34
E AD A ++ P + +R + HIV++ R CK
Sbjct: 1332 ESKADAGASKTYPQQAGTIRKNGHIVIKNRPCK 1364
>10_07_0100 + 12861588-12862601
Length = 337
Score = 26.6 bits (56), Expect = 8.8
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +3
Query: 54 LRCVRSSAAGGIRMGGTVRPLRQPAALRGAL*RTAQGCATPRPLEAAALCRSRE*RPXXX 233
LR +R+SAAGG G V R+ + + +TA+ +P A+A R P
Sbjct: 114 LRPIRTSAAGGAGDGAAVA--RKQRHEQPDVEKTAK----TKPGSASARACRRPASPGAR 167
Query: 234 XXXXXXXRGSGYRPSRRRCLCS 299
SG RPS +R CS
Sbjct: 168 LASLLNSIFSGKRPSAQRPACS 189
>10_02_0192 +
6517985-6518348,6518647-6518699,6519984-6520021,
6522332-6522717,6523752-6523822,6524620-6524732,
6525019-6525337,6525576-6525886,6526493-6527069,
6530483-6530538,6531643-6532126
Length = 923
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 104 CSAATSASCSPGRSVTYRTGLRYTSAAGGCCLVQ 205
C+ + S S GR R G R + + G CC+V+
Sbjct: 259 CAVRSRESGSGGRQGEDRLGRRESHSRGPCCMVE 292
>04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061
Length = 346
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 288 CLCSVHGNGRGAARMFQAHEI 350
C+CS G GRG A Q H++
Sbjct: 124 CVCSSGGCGRGEAHAKQGHDV 144
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 306 RGRYIDTGAERVCNPS 259
R +Y D+G E+VCNPS
Sbjct: 511 RLKYHDSGREKVCNPS 526
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,802,994
Number of Sequences: 37544
Number of extensions: 365234
Number of successful extensions: 1308
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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