Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J22
(440 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g03220.1 68414.m00300 extracellular dermal glycoprotein, puta... 30 0.80
At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family pr... 28 2.4
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 28 3.2
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 3.2
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 3.2
At1g03230.1 68414.m00301 extracellular dermal glycoprotein, puta... 28 3.2
At5g65780.1 68418.m08277 branched-chain amino acid aminotransfer... 27 4.2
At2g34710.1 68415.m04263 homeobox-leucine zipper transcription f... 27 4.2
At1g74790.1 68414.m08665 expressed protein contains similarity t... 27 4.2
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 27 5.6
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 27 5.6
At3g17630.1 68416.m02252 cation/hydrogen exchanger, putative (CH... 27 5.6
At3g12090.1 68416.m01505 senescence-associated family protein si... 27 5.6
At1g76660.1 68414.m08920 expressed protein 27 5.6
At5g01760.1 68418.m00095 VHS domain-containing protein / GAT dom... 26 9.8
At3g49680.1 68416.m05431 branched-chain amino acid aminotransfer... 26 9.8
At1g30490.1 68414.m03727 homeobox-leucine zipper transcription f... 26 9.8
>At1g03220.1 68414.m00300 extracellular dermal glycoprotein,
putative / EDGP, putative similar to extracellular
dermal glycoprotein EDGP precursor [Daucus carota]
GI:285741
Length = 433
Score = 29.9 bits (64), Expect = 0.80
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 224 WTSLPTSAQGSSLQRPRCSAALCGTSQSAPESSWLT*RPNSPAHTNATCCAAP 66
W S+ Q PRC++A+C S++ S P P +N TC P
Sbjct: 69 WVDCDKGYVSSTYQSPRCNSAVC--SRAGSTSCGTCFSPPRPGCSNNTCGGIP 119
>At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 556
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 224 WTSLPTSAQGSSLQRPRCSAALCGTSQSA 138
WT PT A+ SS R C AAL S +
Sbjct: 442 WTEEPTEARSSSSARENCVAALFALSHES 470
>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 2
(SAC2) GI:31415720
Length = 808
Score = 27.9 bits (59), Expect = 3.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 316 RPLPWTLHRHRRREG 272
RPL W LH+H R++G
Sbjct: 381 RPLHWDLHKHSRKKG 395
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 27.9 bits (59), Expect = 3.2
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 276 RVCNPSPSGPQF----VPRPRLDVTPYFCTRQQPPAAEV*RSPVRYVTERPGEQLADVAA 109
RV +P P+ P+ VP PR +V + P AEV RS ++ +P AD+
Sbjct: 100 RVASPRPTSPRVASPRVPSPRAEVPRTLSPKPPSPRAEVPRS----LSPKPPSPRADLPR 155
Query: 108 EQS-RPYE 88
S +P++
Sbjct: 156 SLSPKPFD 163
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 27.9 bits (59), Expect = 3.2
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 276 RVCNPSPSGPQF----VPRPRLDVTPYFCTRQQPPAAEV*RSPVRYVTERPGEQLADVAA 109
RV +P P+ P+ VP PR +V + P AEV RS ++ +P AD+
Sbjct: 99 RVASPRPTSPRVASPRVPSPRAEVPRTLSPKPPSPRAEVPRS----LSPKPPSPRADLPR 154
Query: 108 EQS-RPYE 88
S +P++
Sbjct: 155 SLSPKPFD 162
>At1g03230.1 68414.m00301 extracellular dermal glycoprotein,
putative / EDGP, putative similar to extracellular
dermal glycoprotein EDGP precursor [Daucus carota]
GI:285741
Length = 434
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 224 WTSLPTSAQGSSLQRPRCSAALCGTSQSAPESSWLT*RPNSPAHTNATCCAAPYTS 57
W ++ + PRC++A+C + S + + P P +N TC A P S
Sbjct: 70 WVDCDQGYVSTTYRSPRCNSAVCSRAGSIACGTCFS--PPRPGCSNNTCGAFPDNS 123
>At5g65780.1 68418.m08277 branched-chain amino acid aminotransferase
5 / branched-chain amino acid transaminase 5 (BCAT5)
nearly identical to SP|Q9FYA6 Branched-chain amino acid
aminotransferase 5, chloroplast precursor (EC 2.6.1.42)
(Atbcat-5) {Arabidopsis thaliana}; contains Pfam
profile: PF01063 aminotransferase class IV
Length = 415
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 285 GAERVCNPSPSGPQFV 238
GAER+C PSP+ QFV
Sbjct: 163 GAERMCMPSPTVEQFV 178
>At2g34710.1 68415.m04263 homeobox-leucine zipper transcription
factor (HB-14) identical to homeodomain transcription
factor (ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis
thaliana];
Length = 852
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 68 EQRSRWHSYGRDCSAATSASCSP 136
E RS W YG D AA S SP
Sbjct: 487 EHRSEWADYGVDAYAAASLRASP 509
>At1g74790.1 68414.m08665 expressed protein contains similarity to
hedgehog-interacting protein GI:4868122 from [Mus
musculus]
Length = 695
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 1 GAYYSSFIPCCFAQSYLYYDVYGAAQQVAFVWAGL 105
G +Y S C A Y+Y D+YG VWAG+
Sbjct: 543 GYFYRSETDPCIAGRYVYADLYGNG-----VWAGI 572
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -3
Query: 273 VCNPSPSGPQFVPRPRLDVT--PYFCTRQQPPAAEV*RSPVRYVTERP 136
+CNP P PQ P+P T P QPP SP T P
Sbjct: 39 ICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPP 86
>At4g15180.1 68417.m02328 SET domain-containing protein contains Pfam
profile PF00856: SET domain
Length = 2326
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +1
Query: 43 SYLYYDVYGAAQQVAFVWAGLFGRYVSQLLSGALCDVPHRAALHLGRWRLLPC 201
SYL GA Q+V W GL R+ L + L V L LGR L C
Sbjct: 1919 SYLNLTGEGAFQKVLKDWHGLLERHRLMLEACVLNSVSEEDYLELGRAGLGSC 1971
>At3g17630.1 68416.m02252 cation/hydrogen exchanger, putative
(CHX19) similar to putative Na+/H+-exchanging protein
GB:CAA23036 from [Arabidopsis thaliana]; monovalent
cation:proton antiporter family 2 (CPA2) member,
PMID:11500563
Length = 857
Score = 27.1 bits (57), Expect = 5.6
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +1
Query: 22 IPCCFAQSYLYYDV--YGAAQQ----VAFVWAGLFGRYVSQLLSGALCDVPHRAALHLG 180
+P FA S L DV AQ V + FG+ V + S LC VP R A+ LG
Sbjct: 378 LPLYFAASGLKTDVTTIRGAQSWGLLVLVILTTCFGKIVGTVGSSMLCKVPFREAVTLG 436
>At3g12090.1 68416.m01505 senescence-associated family protein
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 282
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 32 VLHSRICTTMCTEQRSRWHSYGRDCSAATSASCSPGRSVTYRTGLRYTSAAGGC 193
+L S+ CT + E + + RD ++ S C P + TY G+ G C
Sbjct: 138 ILSSKTCTKI--ESWTTLDYFQRDMTSVQSGCCKPPTACTYEAGV--VDGGGDC 187
>At1g76660.1 68414.m08920 expressed protein
Length = 431
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 242 LSPDHGWTSLPTSAQGSSLQRPRCSAALCGTSQSAPESS 126
L+P S SA S+ Q P C +L S P SS
Sbjct: 69 LAPPSSPASFTNSALPSTTQSPNCYLSLAANSPGGPSSS 107
>At5g01760.1 68418.m00095 VHS domain-containing protein / GAT
domain-containing protein weak similarity to Hrs [Rattus
norvegicus] GI:8547026; contains Pfam profiles PF00790:
VHS domain, PF03127: GAT domain
Length = 542
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 261 SPSGPQFVPRPRLDVTPYFCTRQQP 187
+PSGPQF P P PY QP
Sbjct: 463 APSGPQFQPWPLQQQQPYSYGYPQP 487
>At3g49680.1 68416.m05431 branched-chain amino acid aminotransferase
3 / branched-chain amino acid transaminase 3 (BCAT3)
identical to SP|Q9M401 Branched-chain amino acid
aminotransferase 3, chloroplast precursor (EC 2.6.1.42)
(Atbcat-3){Arabidopsis thaliana}
Length = 413
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 285 GAERVCNPSPSGPQFV 238
GAER+C P+P+ QFV
Sbjct: 161 GAERMCMPAPTVEQFV 176
>At1g30490.1 68414.m03727 homeobox-leucine zipper transcription
factor (HB-9) identical to HD-Zip protein GB:CAA71854
GI:2145358 from [Arabidopsis thaliana]
Length = 841
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 68 EQRSRWHSYGRDCSAATSASCSPGRSVTYRTG 163
E R+ W YG D +A S +P RTG
Sbjct: 483 EHRAEWADYGVDAYSAASLRATPYAVPCVRTG 514
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,882,430
Number of Sequences: 28952
Number of extensions: 225869
Number of successful extensions: 709
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 702840360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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