Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J21
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 26 0.31
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 25 0.54
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 3.8
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 22 3.8
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 22 3.8
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 22 3.8
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 22 3.8
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 5.0
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 5.0
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.7
AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of act... 21 8.8
AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity mod... 21 8.8
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 25.8 bits (54), Expect = 0.31
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 206 PHPYSTTYGKTGRKTFKPISKTSLY 280
PHP T +GKTGRKT + KT+ Y
Sbjct: 302 PHP--TYFGKTGRKT---VLKTNKY 321
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 25.0 bits (52), Expect = 0.54
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 160 RIMLIIFASLFATAFA--APVFYDLRQDGEENIQTDIKNVVVLIAVPQKLQIPTDILDYL 333
+I+L+IF T A Y + G+ NI+ + N+ +L +P + + + +L
Sbjct: 244 QIILVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTVIPIHVWTSKEKISFL 303
Query: 334 R 336
R
Sbjct: 304 R 304
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 112 VAFTGNPRTSPSTLVPTAAG 53
VA G P+ +P +L+P+ G
Sbjct: 245 VASFGRPKMTPQSLLPSQTG 264
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 134 TARGVLSRRFYRQSANQSFDPRADCS 57
+A ++ +FY Q+A+ DP CS
Sbjct: 92 SASMAVAAQFYHQAASAVVDPLNSCS 117
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 134 TARGVLSRRFYRQSANQSFDPRADCS 57
+A ++ +FY Q+A+ DP CS
Sbjct: 151 SASMAVAAQFYHQAASAVVDPLNSCS 176
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 134 TARGVLSRRFYRQSANQSFDPRADCS 57
+A ++ +FY Q+A+ DP CS
Sbjct: 92 SASMAVAAQFYHQAASAVVDPLNSCS 117
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 134 TARGVLSRRFYRQSANQSFDPRADCS 57
+A ++ +FY Q+A+ DP CS
Sbjct: 151 SASMAVAAQFYHQAASAVVDPLNSCS 176
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 239 GRKTFKPISKTSLYS 283
GR TF+ +S TS+Y+
Sbjct: 74 GRTTFRWLSSTSIYA 88
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 239 GRKTFKPISKTSLYS 283
GR TF+ +S TS+Y+
Sbjct: 74 GRTTFRWLSSTSIYA 88
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 223 DLRQDGEENIQTDIKNVV 276
D D EEN Q+DI N V
Sbjct: 407 DSCSDSEENSQSDITNNV 424
>AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of
activity of ets genes protein.
Length = 108
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 589 RDPVR-LQDHTAQSHQVISIHPGRPELQDQRF 497
+DP + ++H AQ +++ G PE+ RF
Sbjct: 34 KDPRQWTREHVAQWINLVTQQHGLPEVPSSRF 65
>AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity
modulator protein.
Length = 108
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 589 RDPVR-LQDHTAQSHQVISIHPGRPELQDQRF 497
+DP + ++H AQ +++ G PE+ RF
Sbjct: 34 KDPRQWTREHVAQWINLVTQQHGLPEVPSSRF 65
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,041
Number of Sequences: 336
Number of extensions: 3333
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -