Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J21
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical pr... 32 0.31
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 2.2
U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeo... 29 2.9
AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protei... 29 2.9
AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical ... 29 2.9
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 5.0
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 5.0
U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical pr... 28 5.0
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 5.0
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 5.0
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 5.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 5.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 5.0
CU457741-6|CAM36347.1| 227|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 27 8.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 8.7
>Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical
protein R03G8.1 protein.
Length = 663
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 259 DIKNVVVLIAVPQKLQIPTDILDYLRTNKQSNQPELQDRADV 384
D+ N + I+VP L+ TDIL L N + Q RA +
Sbjct: 435 DVNNPLTAISVPNSLRTNTDILKILNMNSEKLQTHFDTRATI 476
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -1
Query: 635 SELGAGCDRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDAR 465
S L AG D+ H V S SP+ P S P SSGST S T G +TS +
Sbjct: 633 SPLAAG-DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSG 689
Query: 464 PS 459
PS
Sbjct: 690 PS 691
>U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeobox
protein 21 protein.
Length = 495
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +1
Query: 292 PQKLQIPTDILDYLRTNKQSNQPELQDRADVQVMEAFVEPNTPHRVEIGTNNRSEGDGRA 471
PQ++ +P + +Y + Q L+D ME V ++E ++ S+GDG
Sbjct: 63 PQQV-VPPE-RNYAELDAQLESVVLEDHTAESTMEPGVSATVTEQLEEKSDKSSDGDG-T 119
Query: 472 SEVVIPSQRNVDLEAQVDPDE 534
S+ + S ++V+ E + D +E
Sbjct: 120 SKRLTRSLKSVENETEEDHEE 140
>AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protein
protein.
Length = 495
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +1
Query: 292 PQKLQIPTDILDYLRTNKQSNQPELQDRADVQVMEAFVEPNTPHRVEIGTNNRSEGDGRA 471
PQ++ +P + +Y + Q L+D ME V ++E ++ S+GDG
Sbjct: 63 PQQV-VPPE-RNYAELDAQLESVVLEDHTAESTMEPGVSATVTEQLEEKSDKSSDGDG-T 119
Query: 472 SEVVIPSQRNVDLEAQVDPDE 534
S+ + S ++V+ E + D +E
Sbjct: 120 SKRLTRSLKSVENETEEDHEE 140
>AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical
protein F13H6.1 protein.
Length = 690
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -1
Query: 587 GSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPSPSERLFVPISTLCGVLG 408
G +PS C V P NF+ S + + + G +TS P+ + V T LG
Sbjct: 133 GKLTPSDD-CEVTPRNFDRSRRRTFNPAALIRCGRSTSANALLPNYNMDVTTDT--NDLG 189
Query: 407 STNASITC 384
S++ S+TC
Sbjct: 190 SSSKSLTC 197
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 156 DKRSLDSDCARRTLASLLPAIREPVLRPSCRLQRD 52
++ LDSDC + T +S P R +L + ++
Sbjct: 682 EEEELDSDCGKTTFSSFAPLTRHEILAKMAEMYKE 716
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 156 DKRSLDSDCARRTLASLLPAIREPVLRPSCRLQRD 52
++ LDSDC + T +S P R +L + ++
Sbjct: 690 EEEELDSDCGKTTFSSFAPLTRHEILAKMAEMYKE 724
>U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical
protein T14B4.8 protein.
Length = 235
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 235 DGEENIQTDIKNVVVLIAVPQKLQI--PTDILDYLRTNKQSNQPELQDRADVQVMEAFVE 408
DG+ +I+ ++ + + VP K Q+ +LR N Q ++ ++ D +D +++ + E
Sbjct: 29 DGDTDIEEELSHSCKQVIVPSKSQVLFYVSTSTHLRLNHQGSELQVTDPSDFPLLDIWSE 88
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 156 DKRSLDSDCARRTLASLLPAIREPVLRPSCRLQRD 52
++ LDSDC + T +S P R +L + ++
Sbjct: 690 EEEELDSDCGKTTFSSFAPLTRHEILAKMAEMYKE 724
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 156 DKRSLDSDCARRTLASLLPAIREPVLRPSCRLQRD 52
++ LDSDC + T +S P R +L + ++
Sbjct: 682 EEEELDSDCGKTTFSSFAPLTRHEILAKMAEMYKE 716
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 358 PELQDRADVQVMEAFVEPNTPHRVEI-GTNNRSEG 459
P+ D +V + + PNTP+++ I TN+ SEG
Sbjct: 1089 PDGADHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1123
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 358 PELQDRADVQVMEAFVEPNTPHRVEI-GTNNRSEG 459
P+ D +V + + PNTP+++ I TN+ SEG
Sbjct: 1152 PDGADHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1186
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 358 PELQDRADVQVMEAFVEPNTPHRVEI-GTNNRSEG 459
P+ D +V + + PNTP+++ I TN+ SEG
Sbjct: 1152 PDGADHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1186
>CU457741-6|CAM36347.1| 227|Caenorhabditis elegans Hypothetical
protein C42C1.6 protein.
Length = 227
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 333 QVIQYIGRYLQLLRYCDEYNDVFDI 259
Q +Q + ++ QLL++ YNDV DI
Sbjct: 154 QHVQQVQQHQQLLQHIQRYNDVIDI 178
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 374 EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLILKLRSTRMN 535
+P LW+ + +I I LRSV + + R++ QA + L+ ++R T N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 374 EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLILKLRSTRMN 535
+P LW+ + +I I LRSV + + R++ QA + L+ ++R T N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 437 PISTLCGVLGSTNASITCTSALSCNSG 357
PI++L GVL ST A S L C G
Sbjct: 606 PINSLAGVLPSTQAPDIINSVLECGCG 632
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 374 EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLILKLRSTRMN 535
+P LW+ + +I I LRSV + + R++ QA + L+ ++R T N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,476,791
Number of Sequences: 27780
Number of extensions: 332182
Number of successful extensions: 1159
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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