Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J18
         (464 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator Dap1|Sch...    70   2e-13
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar...    27   1.1  
SPBC19C7.12c |||alpha-1,2-mannosyltransferase|Schizosaccharomyce...    27   1.4  
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p...    27   1.9  
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|...    26   2.5  
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos...    26   2.5  
SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces...    26   3.3  
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces...    26   3.3  
SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces pom...    24   9.9  
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa...    24   9.9  

>SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator
           Dap1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 166

 Score = 69.7 bits (163), Expect = 2e-13
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
 Frame = +3

Query: 42  KDLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQ 221
           +D T +EL++Y+G+++   V LA+ G +++VT G +              D++RGLA   
Sbjct: 41  RDYTPAELKEYNGSKNS-LVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNS 99

Query: 222 -----VAAADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLKPGE 356
                +  +D EE D C+DL  +E  +  +W+  F +KY  VGRL+ P E
Sbjct: 100 FDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLISPRE 149


>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
            |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1131

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 29/109 (26%), Positives = 44/109 (40%)
 Frame = -2

Query: 337  RPTMSYFSLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXX 158
            +PT  + + N  S S++   SS       SYSS +   T    KP + S  + A+     
Sbjct: 887  KPTFKFSTSNSGSTSYSIPSSSSRNEGTTSYSS-NITVTSSTLKPSLTSSVSTASSYIAS 945

Query: 157  X*NRRPFVTSKIIPFTASKTLPSLCVPSYFLNSETVRSFLSFGKEGGAG 11
              +     T     F++S TL S  + S   NS TV+   S      +G
Sbjct: 946  SASSNTLSTEP-KTFSSSSTL-SESISSINTNSLTVKPESSLSSSTTSG 992


>SPBC19C7.12c |||alpha-1,2-mannosyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 390

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 234 DNEEYDPCNDLTPDEIASAKEWEEQFREKY 323
           D E Y+ C+  T  EIA    WE +   KY
Sbjct: 265 DGETYNGCHFWTNFEIAKVDFWESEVYSKY 294


>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 584

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 298 HSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLP 185
           H++++A S  + +   S+SSL   +  P+ KP + S P
Sbjct: 510 HNYSQAQSPNLATPSPSFSSLPDVSLPPIVKPNLMSEP 547


>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1036

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -1

Query: 149 PTSLCNIKNNSVYS**NSPIALCA--IVFPQLRNGEILPQFW*RRWC 15
           P+++C I    +     S +  CA  IV   L NG I P  W R WC
Sbjct: 209 PSNICLIVTGCINE---SRLLSCASGIVKEILANGIITPPTWTRPWC 252


>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 556

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 273 DEIASAKEWEEQFREKYDIVGRLLKPGETPNKYSD 377
           DE+   K+W+    E +D  G ++   E  +KY D
Sbjct: 460 DELVYEKDWKLDKSESFDGQGNVVTTAERGSKYFD 494


>SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 497

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -2

Query: 268 VKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXXX*NRRPF-VTSKIIPFTASKTLP 92
           ++S H   ++ S++AT    KP V+S+  +A+Y      +  P    S++ PF     +P
Sbjct: 160 LQSNHNVPTNNSSSATSST-KPSVQSV-GQASYPFLSSVSNFPSNFNSELFPFYFHDVVP 217

Query: 91  SLC 83
           S+C
Sbjct: 218 SIC 220



 Score = 25.0 bits (52), Expect = 5.7
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 316 SLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVAKP 203
           S+ C ++S     S     + G+YS L+ A  CP+  P
Sbjct: 243 SMPCIANSLMAFASIKKLDVFGAYSHLTRALRCPMPGP 280


>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 3131

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 343  RRRPTMSYFSLNCSSHSFAEAISSGVKSL 257
            R RP  + + +   ++SF +++SSG K L
Sbjct: 2784 RNRPKEAVYGVTAGANSFYDSMSSGFKGL 2812


>SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 412

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 159 VRKTDVPL*HQK*FRLQLVKLSHRSVCHRISSTQKR*DPSSV 34
           +RKT + L  +K F  QL   + + +C +     KR D S V
Sbjct: 276 IRKTPLNLSEKKFFAYQLQYAAFQHICQKTLLALKRLDLSKV 317


>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1072

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 118 PFTASKTLPSLCVPSYFLNSETVRSFLSFGKE 23
           PF A   LP   +PSY  +  + ++  S GK+
Sbjct: 473 PFFALPGLPGYDIPSYVESEGSTKTLPSIGKK 504


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,721,230
Number of Sequences: 5004
Number of extensions: 31290
Number of successful extensions: 121
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)