Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J18
(464 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0826 + 11569961-11570301,11572220-11572454 62 2e-10
02_05_1047 + 33745656-33745964 58 3e-09
02_05_0089 - 25715637-25716333,25716481-25717238 54 4e-08
10_08_0543 - 18649894-18650233,18651446-18651981 52 2e-07
10_08_0544 - 18655186-18655567,18656835-18657151 51 5e-07
01_07_0058 + 40799547-40799810,40799942-40799978,40800279-408003... 32 0.26
12_02_0021 + 12393828-12395207 31 0.35
03_05_0756 + 27469002-27469107,27469200-27469369,27470210-274710... 31 0.35
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 29 2.4
04_04_1489 - 33938426-33939363,33939429-33939813 29 2.4
08_01_0618 - 5394841-5395036,5395179-5395244,5395727-5395769,539... 28 4.3
01_03_0201 + 13758227-13758760,13758784-13759452 28 4.3
05_01_0235 - 1768049-1769634,1770695-1770815,1770965-1771033,177... 27 7.4
03_05_0260 + 22468243-22468292,22469125-22469125,22469130-224692... 27 7.4
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 27 7.4
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 27 9.8
06_03_1377 - 29692895-29692899,29700435-29702190 27 9.8
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 27 9.8
05_01_0239 - 1785699-1785980,1786061-1786284,1786380-1786526,178... 27 9.8
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 27 9.8
03_02_0291 + 7148768-7148853,7148966-7149170,7149823-7150238,715... 27 9.8
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548... 27 9.8
02_05_0968 + 33156585-33156941,33158510-33159902,33160035-331601... 27 9.8
>03_02_0826 + 11569961-11570301,11572220-11572454
Length = 191
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +3
Query: 45 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 224
++T+ +L YDG +L+A+ G ++DVT+GR RD+TR LA
Sbjct: 81 EITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDATRALALMSF 140
Query: 225 AAADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRL 341
D + L PDE+ ++WE++F+E+Y VG L
Sbjct: 141 DPIDLT--GDLDGLGPDELEVLQDWEDKFKERYPTVGHL 177
>02_05_1047 + 33745656-33745964
Length = 102
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/99 (29%), Positives = 52/99 (52%)
Frame = +3
Query: 45 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 224
+LT ++LR YDG+ + ++V G ++DVT GR R+++R L G++
Sbjct: 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRAL--GKM 61
Query: 225 AAADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRL 341
+ D + + L+ E+ +WE +F+ KY +V RL
Sbjct: 62 SKDDADVSGDLSGLSDKELGVLADWETKFQAKYPVVARL 100
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 54.4 bits (125), Expect = 4e-08
Identities = 32/101 (31%), Positives = 53/101 (52%)
Frame = +3
Query: 45 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 224
++T ELR YDG+ + +L+A+ G I+DVT+ R RD++R LA ++
Sbjct: 220 EVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALA--KM 277
Query: 225 AAADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLK 347
+ ++ + L P E+ + EWE +F KY VG + K
Sbjct: 278 SFELDDLTGDVSGLGPIELEALHEWEGKFMSKYVKVGTIKK 318
>10_08_0543 - 18649894-18650233,18651446-18651981
Length = 291
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/101 (27%), Positives = 55/101 (54%)
Frame = +3
Query: 45 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 224
++T EL +YDG+ + +L+A+ G I+DV++ R +D++R LA ++
Sbjct: 146 EITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALFAGKDASRALA--KM 203
Query: 225 AAADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLK 347
+ + D + L+ E+++ ++WE +F KY VG + K
Sbjct: 204 SFEPQDLTDDISGLSLLELSALQDWEYKFSSKYVKVGTIKK 244
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/101 (28%), Positives = 53/101 (52%)
Frame = +3
Query: 45 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 224
+++ ELR+YDG+ +L+A+ G I+DVT+ R +D++R LA ++
Sbjct: 73 EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALA--KM 130
Query: 225 AAADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLK 347
+ + + L P E+ + ++WE +F KY VG + K
Sbjct: 131 SFEPQDLTGDISGLGPFELDALQDWEYKFMGKYVKVGTVKK 171
>01_07_0058 +
40799547-40799810,40799942-40799978,40800279-40800362,
40800563-40800615
Length = 145
Score = 31.9 bits (69), Expect = 0.26
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = -2
Query: 316 SLNC--SSHSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXXX*NRR 143
SL C ++ S++ +SS S S A+ P + PR S+ A AAY R
Sbjct: 3 SLLCPAAAASYSSLLSSSFPSRRRPQPSAPLASPAPSSPPRPRSVAAAAAYGYGGDVLMR 62
Query: 142 PFVTSKIIPFTASKTLPSL 86
PF T ++ A + SL
Sbjct: 63 PFDTQTLLISAAVVSAVSL 81
>12_02_0021 + 12393828-12395207
Length = 459
Score = 31.5 bits (68), Expect = 0.35
Identities = 28/91 (30%), Positives = 38/91 (41%)
Frame = -2
Query: 334 PTMSYFSLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXXX 155
P+ +YF + H +A A +S + S H S S S ++ V P LPA A
Sbjct: 9 PSSAYFI--DADHPYAAAAASALTS-HRSRSKWSHLSSLAVPDP----LPASAVAAVPLL 61
Query: 154 *NRRPFVTSKIIPFTASKTLPSLCVPSYFLN 62
RRP V F + LPS P L+
Sbjct: 62 LRRRPHVALSFHLFATRRLLPSGSPPPLLLS 92
>03_05_0756 +
27469002-27469107,27469200-27469369,27470210-27471001,
27471182-27471398,27471972-27472150,27472592-27472833,
27473662-27474052
Length = 698
Score = 31.5 bits (68), Expect = 0.35
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = -2
Query: 301 SHSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXXX*NRRPFVTSKI 122
SHS ++G S+ G + ++ C + L A A + TS +
Sbjct: 539 SHSAINK-NTGSASITGGFVYRGSSDPCLYGRYIYADLYASAMWTGTETPESSGNYTSTL 597
Query: 121 IPFTASKTLPSLCVPSYFLNSETVRSFLSFGKE 23
IPF+ SK P C + N ++ SFG++
Sbjct: 598 IPFSCSKNSPIPCESASGSNQPSLGYIFSFGED 630
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 234 DNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLKPGETPNKYSDDENDDXKSL 404
D EE ++ +EI E EE+ E D+V + + E ++ D+E+D+ + +
Sbjct: 435 DEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEEDEEEDEESDETEGV 491
>04_04_1489 - 33938426-33939363,33939429-33939813
Length = 440
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 231 ADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLK 347
+DNE D C+D++ DE+ S E + EK + + LK
Sbjct: 297 SDNESDDDCDDVSYDELVSMFEELHAYSEKEIVKFKALK 335
>08_01_0618 -
5394841-5395036,5395179-5395244,5395727-5395769,
5396119-5396238,5396653-5396731,5396910-5397177,
5397262-5397305,5397431-5397502,5397756-5397825,
5397929-5397999
Length = 342
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 240 EEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLKPGETPNK 368
+E+D +D DE E E++ RE+ I RL+ PG+T K
Sbjct: 62 DEFD--SDFGEDESEPDDEPEKEVRERLPIKKRLIFPGKTMKK 102
>01_03_0201 + 13758227-13758760,13758784-13759452
Length = 400
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 334 PTMSYFSLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVA 209
P + +F+L+ S A G+KS S L+AAA VA
Sbjct: 249 PALFWFTLHLDGESSPAATIDGIKSHRNVLSVLAAAAVASVA 290
>05_01_0235 -
1768049-1769634,1770695-1770815,1770965-1771033,
1771199-1771323,1771613-1771712,1771806-1771910,
1772559-1772657,1772751-1772867
Length = 773
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = -2
Query: 355 SPGLRRRPTMSYFSLNCSSHSFAEAISSG 269
S GLRRRPT S L CSS S A SG
Sbjct: 21 SRGLRRRPTTSL--LRCSSPSADAASPSG 47
>03_05_0260 +
22468243-22468292,22469125-22469125,22469130-22469285,
22469416-22469919
Length = 236
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -2
Query: 340 RRPTMSYFSLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVA 209
+R S F+ NCS S A S+ S S SL CP A
Sbjct: 163 KRRESSPFTSNCSGGSLTTATSTSTSSSTDSDGSLRQPPPCPRA 206
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 358 VSPGLRRRPTMSYFS-LNCSSHSFAEAISSGVKSLH 254
+S GLR + S L +SH FA A++S + SLH
Sbjct: 466 MSKGLRYGDAVKLTSMLEEASHGFANAVNSTISSLH 501
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 252 PCNDLTPDEIASA-KEWEEQFREKYDIVGRLLKPGETPNKYSDDEN 386
P ND+T ++A + + +++ V R PG+TP K+ D+N
Sbjct: 201 PPNDMTVKQVADKLANFVAKNGRQFENVTRQRNPGDTPFKFLFDKN 246
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 231 ADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLK 347
+D+E D C+D++ DE+ S E + EK + + LK
Sbjct: 385 SDSESDDDCDDVSYDELVSMFEELHAYSEKEIVKFKALK 423
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 231 ADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLK 347
+D+E D C+D++ DE+ S E + EK + + LK
Sbjct: 383 SDSESDDDCDDVSYDELVSMFEELHAYSEKEIVKFKALK 421
>05_01_0239 -
1785699-1785980,1786061-1786284,1786380-1786526,
1786667-1786775,1786880-1786981,1787090-1787164,
1787277-1787453,1787534-1787623,1787717-1787844,
1787909-1788356
Length = 593
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 346 LRRRPTMSYFSLNCSSHSFAEAISSGVKSLHGSYSSLSAAAT 221
LRR + F+ +CSS A S+ +L G+ LSA T
Sbjct: 39 LRRLTSRRVFATSCSSSDSEHAPSASSTALAGAGDDLSAGVT 80
>04_03_1049 +
22015053-22015083,22015770-22015885,22016013-22016108,
22016229-22016285,22016468-22016620,22016754-22016838,
22017097-22017187,22017324-22017488,22017813-22017932,
22018020-22018104,22018234-22018402,22019055-22019173,
22019250-22019440,22019746-22019957,22020905-22021500,
22022538-22022658,22023439-22023868,22024412-22024797,
22024976-22025071,22025380-22025432,22026915-22027061,
22027139-22027309,22027880-22027962,22028049-22028247,
22028668-22028789,22029752-22029818,22029960-22030010,
22030768-22031001,22031263-22031451,22032455-22032646,
22032742-22032936
Length = 1673
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 307 CSSHSFAEAISSGVKSLHGSYSSL 236
C++HSF + +++ S HG +S L
Sbjct: 117 CTAHSFCKTLTASDTSTHGGFSVL 140
>03_02_0291 +
7148768-7148853,7148966-7149170,7149823-7150238,
7150325-7150631,7150722-7151186
Length = 492
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -2
Query: 289 AEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAY 170
++A+S S+H +++S A+ P + S+P +AAY
Sbjct: 4 SKAVSESDMSVHSTFASRYVRASLPRYRMPENSIPKEAAY 43
>03_02_0079 +
5485090-5485238,5486066-5486137,5486764-5486840,
5486946-5486989,5487583-5487639,5487640-5487686,
5488010-5488184,5489501-5489662,5489845-5489883
Length = 273
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +3
Query: 192 DSTRGLATGQVAAADNEEYDPCNDLTPDEIASAKEWEEQFREKYDIVGRLLKPGETPNKY 371
DS +GL++ + A + +T ++ S +W + + E+Y G+++ +Y
Sbjct: 105 DSLQGLSSMEYYACVFSKKGIIGFVTSFQVNSIVDWRKFYFERYIFAGKIV------GRY 158
Query: 372 SDDENDDXKSL 404
DDE + K L
Sbjct: 159 YDDEGNPTKYL 169
>02_05_0968 +
33156585-33156941,33158510-33159902,33160035-33160118,
33160216-33160265
Length = 627
Score = 26.6 bits (56), Expect = 9.8
Identities = 28/97 (28%), Positives = 42/97 (43%)
Frame = -2
Query: 301 SHSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXXX*NRRPFVTSKI 122
S S + + SG++S GS S SA A+ P +E L + A + + +
Sbjct: 432 SSSSSSSSFSGIRSGRGSPPS-SAPASYISRAPSIERLLEEDAALLRKKRQQSADKLALM 490
Query: 121 IPFTASKTLPSLCVPSYFLNSETVRSFLSFGKEGGAG 11
T + + P V S S +SFLSFGK+ G
Sbjct: 491 AMTTTTMSTPPARV-SGAARSRGFKSFLSFGKKNRRG 526
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,268,808
Number of Sequences: 37544
Number of extensions: 211411
Number of successful extensions: 691
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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