Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J18
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   3.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.6  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 204 GLATGQVAAADNEEYDPCNDLTPDEIASAKEWEE 305
           G+A+ +V +  N+  +P     P E+     W+E
Sbjct: 355 GIASAKVRSMFNDSGNPILKAKPSEVVQILGWKE 388


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 219 QVAAADNEEYDPC 257
           +V A+ NEEY PC
Sbjct: 219 EVPASRNEEYYPC 231


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 95  PIALCAIVFPQLRNGEILPQF 33
           P  + A+V P L+N + +P F
Sbjct: 387 PFFVLALVRPFLKNPDAIPAF 407


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,719
Number of Sequences: 438
Number of extensions: 1904
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)