Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J16
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   0.82 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.8  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 200 VLKSHVQFCIKESELATNSIPHNLEIEYGETPGQKLD 310
           V+K   Q  + E+ L  N    + EI+  + P QK+D
Sbjct: 43  VVKQTKQSVLDEARLRANDSSVDPEIDIEDKPAQKID 79


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = +2

Query: 203 LKSH---VQFCIKESELATNSIPHNLEIE---YGETPGQKLDILGTDLPD 334
           +KSH    ++  ++   AT    H+L+I    YG TP   LD  G   PD
Sbjct: 278 MKSHSNVYRYSCRDCSYATKYC-HSLKIHLRRYGHTPNVVLDEEGNPCPD 326


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 277 DLQVVWYAVCS*FTLLYTKLNVTFQNI 197
           +L +VW  VC+    +Y +L V   N+
Sbjct: 161 ELDLVWREVCTFVVQVYPRLVVNTINL 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,221
Number of Sequences: 336
Number of extensions: 2955
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)