Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J16
         (585 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26755| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_57195| Best HMM Match : UPF0126 (HMM E-Value=1.8)                   29   3.7  
SB_48999| Best HMM Match : 7tm_1 (HMM E-Value=2.3e-08)                 28   6.4  
SB_33736| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-35)                 28   6.4  
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                28   6.4  
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  
SB_39637| Best HMM Match : SAA (HMM E-Value=5.5)                       27   8.5  
SB_2560| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.5  

>SB_26755| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1607

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 255 AYHTTWRSNTAKH--LDK-NWTYLEQTCQIIHQFSSTFTARTGKIIARISRTGMRY 413
           +Y   W + +  H  + K  W+ +     +I  +S+T  AR+G I A +  +G RY
Sbjct: 249 SYKANWGAFSDVHSGIQKYEWSVMRAGSSLITGYSNTALARSGTISALVLTSGQRY 304


>SB_57195| Best HMM Match : UPF0126 (HMM E-Value=1.8)
          Length = 1699

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 255 AYHTTWRSNTAKH--LDK-NWTYLEQTCQIIHQFSSTFTARTGKIIARISRTGMRY 413
           +Y   W + +  H  + K  W+ +     +I  +S+T  AR+G I A +  +G RY
Sbjct: 195 SYKANWGAFSDVHSGIQKYEWSVMRAGSSLITGYSNTALARSGTISALVLTSGQRY 250


>SB_48999| Best HMM Match : 7tm_1 (HMM E-Value=2.3e-08)
          Length = 1158

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -3

Query: 295  RCFAVFDLQVVWYAVCS*FTLLYTKLNVTFQNILRRWISFGPHS 164
            R F+VFD   + ++V     LLYT + + F+  LR  I  G HS
Sbjct: 1077 RWFSVFDF--LRFSVSFINPLLYTFMKLDFREALRSLIPIGKHS 1118


>SB_33736| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-35)
          Length = 368

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -3

Query: 295 RCFAVFDLQVVWYAVCS*FTLLYTKLNVTFQNILRRWISFGPHS 164
           R F+VFD   + ++V     LLYT + + F+  LR  I  G HS
Sbjct: 287 RWFSVFDF--LRFSVSFINPLLYTFMKLDFREALRSLIPIGKHS 328


>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 4277

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
 Frame = +1

Query: 199 CFEKSRSILYKGE*ISYKQHTTQPGDR-------IRRNTWTKIGHTWNRLA--------R 333
           C  K+ + + KG  I Y ++   P +R       + R TWTK+G T   L         R
Sbjct: 514 CLPKNDNCIIKG--ICYAKNEANPRNRRHKCVPLVSRVTWTKVGATHRALGIRSGKIPNR 571

Query: 334 SFTNSRL---HLPRVLARLSREYRAP 402
           + T S     HL   LARL + ++ P
Sbjct: 572 AITASSTWSPHLAPWLARLQKRFKRP 597


>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 744

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 268 PGDRIRRNTWTKIGHTWNRLARSFTNSRLHLPRVL 372
           P D I +NT+ +  H    +  S T  R H P+VL
Sbjct: 571 PEDSIAKNTYNRTSHEVFPIYVSSTPRRFHCPKVL 605


>SB_39637| Best HMM Match : SAA (HMM E-Value=5.5)
          Length = 195

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 452 AESILIRYLDLEYIAHAGARYSRDNLASTRG 360
           A+SI   +LD++Y  +   RYS D   + RG
Sbjct: 97  AKSINASFLDMDYKIYDDPRYSNDTFQTLRG 127


>SB_2560| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 230

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 95  VQNTVEMSSLIMEIKDLEKEYSPTMWSERYP 187
           V  T EM+  + ++KD +   SPT++ +R P
Sbjct: 13  VPETPEMNREVSDVKDFDDPRSPTVYFDRTP 43


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,870,668
Number of Sequences: 59808
Number of extensions: 365067
Number of successful extensions: 902
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)