Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J16
         (585 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41011-7|AAA82290.1|  271|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    28   4.2  
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    28   4.2  
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p...    28   5.6  
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p...    28   5.6  
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical ...    27   7.4  
AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p...    27   9.8  
AF003386-4|AAO38631.1|  452|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF003386-3|AAO38630.1|  499|Caenorhabditis elegans Hypothetical ...    27   9.8  

>U41011-7|AAA82290.1|  271|Caenorhabditis elegans Hypothetical
           protein D2024.2 protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +2

Query: 155 YSPTMWSERYPTPEDVLKSHVQFCIKESELATNS--IPHNLEIEYGETPGQKLDILGTDL 328
           YSP+ W       ++V+           E   N   IP    + YG    QK+DI G D 
Sbjct: 8   YSPSCWVPG-KNRDEVMNDFFAGIKNAFEALKNDEKIPRKENVAYGMEENQKVDIWG-DA 65

Query: 329 PDHSPILVYIYRAYW 373
            D   +L++I+  YW
Sbjct: 66  SD--KLLIFIHGGYW 78


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
             K07E12.1a protein.
          Length = 13100

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 416   YIAHAGARYSRDNLASTRGKCRRELVNDLASLFQVCP 306
             YIA  G  Y  D   +  G+C    VN   S +  CP
Sbjct: 12979 YIAKDGQCYDIDECETNNGQCSEGCVNTPGSYYCACP 13015


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
          Length = 13100

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 416   YIAHAGARYSRDNLASTRGKCRRELVNDLASLFQVCP 306
             YIA  G  Y  D   +  G+C    VN   S +  CP
Sbjct: 12979 YIAKDGQCYDIDECETNNGQCSEGCVNTPGSYYCACP 13015


>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
           protein F10G7.10c protein.
          Length = 1824

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +1

Query: 49  NLNNQVSLKTLSVFKGSKYSRNVITYNGD*GFREGVFAN 165
           ++++++SLK++++FK S    N+ T NG   +R    AN
Sbjct: 475 SVDSEISLKSVNIFKESSRFLNMTTTNGRPKWRVMTMAN 513


>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
           protein F10G7.10a protein.
          Length = 2025

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +1

Query: 49  NLNNQVSLKTLSVFKGSKYSRNVITYNGD*GFREGVFAN 165
           ++++++SLK++++FK S    N+ T NG   +R    AN
Sbjct: 475 SVDSEISLKSVNIFKESSRFLNMTTTNGRPKWRVMTMAN 513


>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
           protein F10G7.10b protein.
          Length = 1884

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +1

Query: 49  NLNNQVSLKTLSVFKGSKYSRNVITYNGD*GFREGVFAN 165
           ++++++SLK++++FK S    N+ T NG   +R    AN
Sbjct: 475 SVDSEISLKSVNIFKESSRFLNMTTTNGRPKWRVMTMAN 513


>Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical
           protein R07B5.3 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = -2

Query: 494 SSLYLCYISARVTPAESILIRYLDLEYIAHAGARYSRDNLASTRGKCRRELVNDLASLFQ 315
           S+  L Y  A + PAESI+   + + Y ++  ++       STR      L N+   ++Q
Sbjct: 91  STTILTYFCATLDPAESIVPLLVAVYYFSNYSSQLYTVLFCSTRTLI---LFNEKNKIYQ 147

Query: 314 VCPIFV 297
           +C +F+
Sbjct: 148 LCILFL 153


>AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical
           protein Y43F8A.4 protein.
          Length = 369

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -2

Query: 422 LEYIAHAGARYSRDNLASTRGKCRRELVNDLASLFQVCPIFVQVFRRI 279
           L Y    G R   +N     GKCR +    LA    +  IF  VFRR+
Sbjct: 80  LFYYVEGGTREFLEN--GIPGKCRPKKTEFLAYYIWIVTIFKDVFRRV 125


>AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p450
           family protein 33C1 protein.
          Length = 497

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 289 NTWTKIGHTWNRLARSFTNSRLHLPRVLARLSREY 393
           NTW KI  T+ R A ++TN ++ LP V      EY
Sbjct: 75  NTWDKIKETFIRDADTYTN-KVVLPMVTLSRGGEY 108


>AF003386-4|AAO38631.1|  452|Caenorhabditis elegans Hypothetical
           protein F59E12.6b protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = -2

Query: 518 SHIQI*MFSSLYLCYISA------RVTPAESILIRYLDLEYIAHAGARYSRDNL 375
           S   + +F+S   C++S       RV   ES+L+ +  +EY+ +A  +Y++ NL
Sbjct: 29  SESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNFTSMEYLNYA-LQYNKKNL 81


>AF003386-3|AAO38630.1|  499|Caenorhabditis elegans Hypothetical
           protein F59E12.6a protein.
          Length = 499

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = -2

Query: 518 SHIQI*MFSSLYLCYISA------RVTPAESILIRYLDLEYIAHAGARYSRDNL 375
           S   + +F+S   C++S       RV   ES+L+ +  +EY+ +A  +Y++ NL
Sbjct: 76  SESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNFTSMEYLNYA-LQYNKKNL 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,214,918
Number of Sequences: 27780
Number of extensions: 277934
Number of successful extensions: 807
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)