Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J16
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        23   2.9  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   3.9  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   3.9  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   3.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.7  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/45 (20%), Positives = 20/45 (44%)
 Frame = +2

Query: 305 LDILGTDLPDHSPILVYIYRAYWQDYRENIAHRHALYILNQDIVL 439
           LD+    L    P++ Y++   +     +       Y+L +D+V+
Sbjct: 7   LDVYTNSLDQSKPVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVV 51


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 335 DLASLFQVCPIFVQVFRRIRSPGCVVC 255
           D+  L+ + P  +  + RI  P C VC
Sbjct: 392 DINKLYGMTPSDIDKYSRIVFPVCFVC 418


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 335 DLASLFQVCPIFVQVFRRIRSPGCVVC 255
           D+  L+ + P  +  + RI  P C VC
Sbjct: 392 DINKLYGMTPSDIDKYSRIVFPVCFVC 418


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 335 DLASLFQVCPIFVQVFRRIRSPGCVVC 255
           D+  L+ + P  +  + RI  P C VC
Sbjct: 330 DINKLYGMTPSDIDKYSRIVFPVCFVC 356


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 532 IEPICPIFKYECSARCICVI 473
           + P  PI  YEC+ RC C I
Sbjct: 465 VPPGTPI--YECNKRCNCDI 482


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 495 QLVVSVLYLCESDSGRVYPN-TIS 427
           +L   V+Y C SD+G  Y   TIS
Sbjct: 162 ELYPGVVYKCVSDNGESYAKFTIS 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,675
Number of Sequences: 438
Number of extensions: 3507
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)