Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J15
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 94 4e-20
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 93 7e-20
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 92 2e-19
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 89 2e-18
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 86 1e-17
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 78 4e-15
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 46 1e-05
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 46 1e-05
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 43 1e-04
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 40 0.001
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 39 0.002
Z81115-2|CAB03292.1| 314|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 28 3.0
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 5.3
Z82096-7|CAB05033.2| 332|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 9.2
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic gl... 27 9.2
AF067947-9|AAK68398.1| 230|Caenorhabditis elegans Hypothetical ... 27 9.2
AF067216-6|AAC17522.1| 400|Caenorhabditis elegans Hypothetical ... 27 9.2
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 94.3 bits (224), Expect = 4e-20
Identities = 47/98 (47%), Positives = 66/98 (67%)
Frame = +2
Query: 32 LAMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFK 211
++ +F+G+ +K+ SENF+++MK +GVGLITRKAA + PT+E++ EGD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 212 TTEMKFKPGEEFEEERADGVKVKSVCTFEGNILKQIQK 325
T + FK G+EF+E DG VKSV FE IQK
Sbjct: 60 NTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 93.5 bits (222), Expect = 7e-20
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = +2
Query: 41 DFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTE 220
DFIG+ +K+ +ENFD++MK +GVGLITRKAA + P +E+R +G+ +NF STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 221 MKFKPGEEFEEERADGVKVKSVCTFEGNILKQIQKAADGLEVTYIREFGPEELKAVMT-- 394
+ FK GEEF E D S+ TFE L Q + + E K + T
Sbjct: 65 LSFKLGEEFVENSPDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQ 124
Query: 395 AKDVTCTRIYQ 427
+ DV C R ++
Sbjct: 125 SGDVICRREWE 135
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 91.9 bits (218), Expect = 2e-19
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 1/137 (0%)
Frame = +2
Query: 20 KNLPLAMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTS 199
+N+P+ D +GK + +SENFD+++K +GVG R A P +E GDE+ ++
Sbjct: 14 RNMPIQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSN 72
Query: 200 STFKTTEMKFKPGEEFEEERADGVKVKSVCTFEGNILKQIQKAADGLEVTYIREFGPE-E 376
STFK +K+K G +E+ ADG V SV + E + L QI+ G + + I + +
Sbjct: 73 STFKNYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGK 132
Query: 377 LKAVMTAKDVTCTRIYQ 427
L V T V CTR+Y+
Sbjct: 133 LVIVCTCNGVKCTRVYE 149
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 88.6 bits (210), Expect = 2e-18
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Frame = +2
Query: 26 LPLAMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSST 205
+P+ D +GK + +SENFD+++K +GVG R A P +E GDE+ ++ST
Sbjct: 1 MPIQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNST 59
Query: 206 FKTTEMKFKPGEEFEEERADGVKVKSVCTFEGNILKQIQKAADGLEVTYIREFGPE-ELK 382
FK +K+K G +E+ ADG V SV + E + L QI+ G + + I + +L
Sbjct: 60 FKNYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLV 119
Query: 383 AVMTAKDVTCTRIYQ 427
V T V CTR+Y+
Sbjct: 120 IVCTCNGVKCTRVYE 134
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 86.2 bits (204), Expect = 1e-17
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Frame = +2
Query: 35 AMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKT 214
A F+G+ +K+ SENF+D++K +GVGL+ RKAA A PT+E++ G++++ STFK
Sbjct: 3 AEQFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKN 61
Query: 215 TEMKFKPGEEFEEERADGVKVKSVCTFEGNILKQIQKAADGLEVTYI--REFGPEELKAV 388
T ++F G EF+E DG + KS T E + +QK + + R F E+L
Sbjct: 62 TTLEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITT 121
Query: 389 MTAKDVTCTRIY 424
+ + V R Y
Sbjct: 122 LQSGSVISRRAY 133
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 77.8 bits (183), Expect = 4e-15
Identities = 36/86 (41%), Positives = 59/86 (68%)
Frame = +2
Query: 41 DFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTE 220
+FIG+ +K+ SENF++++K +GVGL+ RKAA+ +PT+E++ +GD ++F STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 221 MKFKPGEEFEEERADGVKVKSVCTFE 298
+ FK E+F E D ++ TFE
Sbjct: 65 LAFKIREKFVEIAPDERSYNTLVTFE 90
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 46.0 bits (104), Expect = 1e-05
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +2
Query: 44 FIGKKYKMTTSENFDDFMKALGVGLITRKAAN--AVTPTVELRKEGDEYNFVTSSTFKTT 217
F GK Y + SENFD+F+ A GV R+ V+ + + +YN ++ K T
Sbjct: 12 FFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNT 70
Query: 218 EMK-FKPGEEFEEERADGVKVKSVCTFEGNILKQIQKAADGLE---VTYIREFGPEELKA 385
++ G+ FE E DGV K +F+ +L + + E TY ++L
Sbjct: 71 LYHGWELGKTFEAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVM 130
Query: 386 VMTAKDVTCTRIYQ 427
M +TC R ++
Sbjct: 131 KMVNNGITCRRWFK 144
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 46.0 bits (104), Expect = 1e-05
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +2
Query: 44 FIGKKYKMTTSENFDDFMKALGVGLITRKAAN--AVTPTVELRKEGDEYNFVTSSTFKTT 217
F GK Y + SENFD+F+ A GV R+ V+ + + +YN ++ K T
Sbjct: 27 FFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNT 85
Query: 218 EMK-FKPGEEFEEERADGVKVKSVCTFEGNILKQIQKAADGLE---VTYIREFGPEELKA 385
++ G+ FE E DGV K +F+ +L + + E TY ++L
Sbjct: 86 LYHGWELGKTFEAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVM 145
Query: 386 VMTAKDVTCTRIYQ 427
M +TC R ++
Sbjct: 146 KMVNNGITCRRWFK 159
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 44 FIGKKYKMTTSENFDDFMKALGVGLITRKAAN--AVTPTVELRKEGDEYNFVTSSTFKTT 217
F G+ Y++ SENFD+F+ + GV R+ +T + +E +YN ++ K T
Sbjct: 7 FFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLTSKKNT 65
Query: 218 EMK-FKPGEEFEEERADGVKVKSVCTFEGNILKQ 316
+ ++ G++FE DG + + F+ IL +
Sbjct: 66 NYQAWELGKKFEAPGLDGNQHEITFDFKDEILSE 99
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 39.9 bits (89), Expect = 0.001
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Frame = +2
Query: 59 YKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP- 235
+ + SENFD+++ A G G TRK T K ++ F S+ ++ +K
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNV 87
Query: 236 --GEEFEEERADGVKVKSVCTF-EGNILKQIQ--KAADGLEVTYIREFGPEELKAVMTAK 400
G+ F+ E D K + T +G++ + + + D E TY F E L M+
Sbjct: 88 QLGKAFQGEGLDSTKHEITFTLKDGHLFEHHKPLEGGDAKEETYEYLFDKEFLLVRMSFN 147
Query: 401 DVTCTRIYQ 427
V R Y+
Sbjct: 148 GVEGRRFYK 156
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Frame = +2
Query: 59 YKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP- 235
+ + SENFD+++ A G G TRK T K ++ F S+ ++ +K
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANKNLFDYSNLTSKKDVFYKNV 89
Query: 236 --GEEFEEERADGVKVKSVCTF-EGNILKQIQKAADG--LEVTYIREFGPEELKAVMTAK 400
G +FE E D K + T +G++ + + +G E TY F + L M+
Sbjct: 90 QIGSKFEGEGLDNTKHEVTFTLKDGHLFEHHKPLEEGESKEETYEYYFDGDFLIQKMSFN 149
Query: 401 DVTCTRIYQ 427
++ R Y+
Sbjct: 150 NIEGRRFYK 158
>Z81115-2|CAB03292.1| 314|Caenorhabditis elegans Hypothetical
protein T05D4.2 protein.
Length = 314
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -1
Query: 370 RSELPDVSDL--QTVGS-LLYLLQDVAFKSAYRLHLDTISAFLFEFFTRLELHL 218
R ++PDV+ V LLYLLQ V + HLDT F ++ R + L
Sbjct: 160 RKDIPDVNIFGSNVVNEDLLYLLQTVNITDSVEFHLDTAEIFPYDIPVRAKYFL 213
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 47 IGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMK 226
+GK++K TT NF DF + GV L E E D++ S TF + +
Sbjct: 233 MGKEWKRTTKHNFRDFWASSGVPLDMLMTFLDREIEAEYIDEDDQFFTGVSETFNVKDSR 292
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 125 RKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEFEE 253
+ A + TP D+ T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = -1
Query: 385 SFQLFRSELPDVSDLQTVGSLLYLLQDVAFKSAYRLHLDTISAF 254
++QL E PD+SD+ +GS++ ++++ ++ + HL+ I F
Sbjct: 177 TYQLMHEE-PDISDVTRIGSMIKVMENST--TSDKAHLECIKDF 217
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 405 TSLAVITAFNSSGPNSLM*VTSRPSAAFCICFRMLPSK 292
T + VIT G L+ SRP + CI ++ PSK
Sbjct: 166 TVVGVITTHAKLGDFYLVWSPSRPRSTICIAYKFCPSK 203
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 5.3
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -2
Query: 237 PGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSS 85
PGL F S++ VT S +L SST + +A+ I+PT S F SS
Sbjct: 842 PGL-FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>Z82096-7|CAB05033.2| 332|Caenorhabditis elegans Hypothetical
protein ZK909.5 protein.
Length = 332
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 EEFEEERADGVKVKSVCT-FEGNILKQIQKAADGLEVTYIREF 364
++F+ E D +KS+C FEG +K++ K L++TY +EF
Sbjct: 134 DDFKIE-CDEFDLKSICDDFEGMQIKRM-KIEGRLDITYYQEF 174
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 26.6 bits (56), Expect = 9.2
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 219 SVVLNVEEVTKL-YSSPSLRSSTVGVTALAALRVISPTPSAFMKSSKFSDVVILYFLPMK 43
S+ LN E + +S P L + G++ + +R +P+AF++ ++S VI+ F+ +
Sbjct: 401 SLKLNSERARDIDFSLPFLDT---GISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIH 457
Query: 42 SMAKGRFLF 16
A FLF
Sbjct: 458 VAAISIFLF 466
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 26.6 bits (56), Expect = 9.2
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 219 SVVLNVEEVTKL-YSSPSLRSSTVGVTALAALRVISPTPSAFMKSSKFSDVVILYFLPMK 43
S+ LN E + +S P L + G++ + +R +P+AF++ ++S VI+ F+ +
Sbjct: 401 SLKLNSERARDIDFSLPFLDT---GISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIH 457
Query: 42 SMAKGRFLF 16
A FLF
Sbjct: 458 VAAISIFLF 466
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 70 HIRELRRFHEGTRCGTDHPQGG*CCD 147
++RE R E T C + G CCD
Sbjct: 268 NLREKDRLPENTHCDKERKDGNRCCD 293
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 70 HIRELRRFHEGTRCGTDHPQGG*CCD 147
++RE R E T C + G CCD
Sbjct: 268 NLREKDRLPENTHCDKERKDGNRCCD 293
>AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic
glutamate receptor NMR-2 protein.
Length = 433
Score = 26.6 bits (56), Expect = 9.2
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 219 SVVLNVEEVTKL-YSSPSLRSSTVGVTALAALRVISPTPSAFMKSSKFSDVVILYFLPMK 43
S+ LN E + +S P L + G++ + +R +P+AF++ ++S VI+ F+ +
Sbjct: 108 SLKLNSERARDIDFSLPFLDT---GISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIH 164
Query: 42 SMAKGRFLF 16
A FLF
Sbjct: 165 VAAISIFLF 173
>AF067947-9|AAK68398.1| 230|Caenorhabditis elegans Hypothetical
protein T10B5.4 protein.
Length = 230
Score = 26.6 bits (56), Expect = 9.2
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -1
Query: 313 LQDVAFKSAYRLHLDTISAFLFEFFTRLELHLRGLECRRGDEIVFVTFLAQ--LHGWGHS 140
+ ++ F++ H D + FL E F +E L C D F L L S
Sbjct: 1 MPELTFQTGLLEHKDQVHKFLVEHFRVMEPITTSLSCSEEDVAEFFVDLTMSGLEDEKSS 60
Query: 139 ISRLAGDQSHTECLHEIVE 83
I G++ CL+ + E
Sbjct: 61 ILVFDGEEIVAVCLNAVKE 79
>AF067216-6|AAC17522.1| 400|Caenorhabditis elegans Hypothetical
protein C35E7.6 protein.
Length = 400
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 296 EGNILKQIQKAADGLEVTYIREFGPEELKAVMTAKDVT 409
EG +LK D +E Y+ + P E+KA+ KDVT
Sbjct: 135 EGRVLKMCY---DEIEKNYV-DMSPTEIKALTQLKDVT 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,820,109
Number of Sequences: 27780
Number of extensions: 220449
Number of successful extensions: 565
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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