Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J15
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...   158   2e-41
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    66   2e-13
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    52   2e-09
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   2.9  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score =  158 bits (384), Expect = 2e-41
 Identities = 74/131 (56%), Positives = 95/131 (72%)
 Frame = +2

Query: 41  DFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTE 220
           DF+GK+YK+ +SENFDDFMKALGVG++TRK  ++V+P VEL +    Y   T+S FK TE
Sbjct: 3   DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62

Query: 221 MKFKPGEEFEEERADGVKVKSVCTFEGNILKQIQKAADGLEVTYIREFGPEELKAVMTAK 400
           +KFK GEEFEEE  DG KVKSVCT +GN L Q+QK     + T  REF   E+KA+M   
Sbjct: 63  IKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVD 120

Query: 401 DVTCTRIYQVQ 433
           D+ CTR+Y++Q
Sbjct: 121 DIICTRVYKIQ 131


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 65.7 bits (153), Expect = 2e-13
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
 Frame = +2

Query: 56  KYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP 235
           K++  +  NF++F K LG   +         P+ EL K GDE+ F +SS   T    FK 
Sbjct: 7   KFQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKM 65

Query: 236 GEEFEE--ERADGVKVKSVCTFEGNILKQIQKAADGLEVTYIREFGPEELKA-VMTAK-D 403
              FEE        K ++V + EGN  K   +  D L+VT + EF   EL   + T K D
Sbjct: 66  NVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHISTNKSD 125

Query: 404 VTCTRIYQ 427
           V  TR+Y+
Sbjct: 126 VKATRVYK 133


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
 Frame = +2

Query: 56  KYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP 235
           K++  +  NF++F K LG   +         P+ EL K GDE+ F +SS   T    FK 
Sbjct: 5   KFQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKM 63

Query: 236 GEEFEE--ERADGVKVKSVCTFEGNILKQIQKAADGLEVT 349
              FEE        K ++V + EGN  K   +  D L+VT
Sbjct: 64  NVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 225 FISVVLNVEEVTKLYSSPSLRSSTV 151
           FIS+++  +E+  + +SP L + T+
Sbjct: 9   FISLIILNDEIYNIIASPQLNNPTL 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,203
Number of Sequences: 438
Number of extensions: 2462
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)