Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J15
         (478 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g48770.1 68416.m05326 hypothetical protein                          29   1.2  
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR...    29   1.6  
At3g45120.1 68416.m04870 hypothetical protein                          28   3.8  
At3g01880.1 68416.m00133 hypothetical protein                          27   5.0  
At5g63450.1 68418.m07965 cytochrome P450, putative                     27   6.6  
At4g29540.1 68417.m04213 bacterial transferase hexapeptide repea...    27   6.6  
At3g06020.1 68416.m00687 expressed protein ; expression supporte...    27   6.6  
At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to...    27   6.6  
At3g01870.1 68416.m00132 hypothetical protein                          27   8.7  
At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase NAD-bi...    27   8.7  
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F...    27   8.7  
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F...    27   8.7  
At1g27040.2 68414.m03296 nitrate transporter, putative contains ...    27   8.7  
At1g27040.1 68414.m03297 nitrate transporter, putative contains ...    27   8.7  

>At3g48770.1 68416.m05326 hypothetical protein
          Length = 1899

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +2

Query: 5    FDRTNKNLPLAMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDE- 181
            FDRT K  P    FI ++Y  +   +F + + A+GVG  + KA   +   V    E D  
Sbjct: 1455 FDRTWKLEPCDGPFIDEEYYGSDINSFREELIAIGVGHDSDKACQLLARNVYKLSETDAI 1514

Query: 182  ---YNFVTSSTFK 211
               Y F++ + +K
Sbjct: 1515 SRVYRFLSEAEWK 1527


>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1187

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 390 ITAFNSSGPNSLM*VTSRPSAAFCIC 313
           +  F+  GP SL+ +TSR    FC+C
Sbjct: 266 LEGFDWLGPGSLIIITSRDKQVFCLC 291


>At3g45120.1 68416.m04870 hypothetical protein
          Length = 106

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 184 VFVTFLAQLHGWGHSISRLAGDQSHTECLHEIV 86
           +FV+F+  +   G+++SR  GD + ++C+ + V
Sbjct: 35  LFVSFITTVKTLGNNVSRTHGDDAESDCVCDSV 67


>At3g01880.1 68416.m00133 hypothetical protein
          Length = 592

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 96  MKSSKFSDVVILYFLPMKSMAKGRFLFVRS 7
           M  + F+D+V+  F P    A  +FLF++S
Sbjct: 384 MFGATFTDIVVWLFFPYNGNAHLKFLFIKS 413


>At5g63450.1 68418.m07965 cytochrome P450, putative
          Length = 510

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 224 KFKPGEEFEEERADGVK--VKSVCTFEGNILKQIQKAADGLEVTY 352
           +FKP   FEEE + G K  +KSV +F+  + +   +   G E+ +
Sbjct: 413 EFKPNRWFEEEPSYGTKPVLKSVSSFKFPVFQAGPRVCIGKEMAF 457


>At4g29540.1 68417.m04213 bacterial transferase hexapeptide
           repeat-containing protein similar to
           UDP-acetylglucosamine acyltransferase [Acinetobacter sp.
           M-1] GI:13358850; contains Pfam profile PF00132:
           Bacterial transferase hexapeptide (three repeats)
          Length = 334

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 467 SAALQCFKLVFTEPGRSWCKSRPWL 393
           SA LQ  +  FTE  R  CK R WL
Sbjct: 306 SAMLQSIRDSFTESRRGICKFRQWL 330


>At3g06020.1 68416.m00687 expressed protein ; expression supported
           by MPSS
          Length = 300

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 158 ELRKEGDEYNFVTSSTFKTTEMKFKPGEEFEEERADGVKVKSV 286
           E ++E +E    T  T +  E +    +E EEE+ + +KVK V
Sbjct: 228 ETKEEKEEEEEETIETVRDNEEEIPEYKEEEEEKEEEIKVKGV 270


>At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to
           nitrate transporter (NTL1) GI:3377517 [Arabidopsis
           thaliana]
          Length = 585

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 62  KMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEG 175
           K T +E     ++ +GVGL+    A AV   VE++++G
Sbjct: 414 KATKTETGVTHLQRIGVGLVLSILAMAVAALVEIKRKG 451


>At3g01870.1 68416.m00132 hypothetical protein
          Length = 583

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 96  MKSSKFSDVVILYFLPMKSMAKGRFLFVRS 7
           M    F+D+V+  F P    A+ +FLF +S
Sbjct: 379 MFGGTFTDIVVWIFYPFNGNARLKFLFFKS 408


>At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase
           NAD-binding domain-containing protein contains Pfam
           profile: PF03446 NAD binding domain of
           6-phosphogluconate
          Length = 299

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -1

Query: 466 QPPCSASNWYLLNLVDPG-ASHVLGCHYSFQLFRSELPDVSDLQTVG 329
           +P  +   W  + ++     SH+L   YS  ++  +L    DLQT G
Sbjct: 10  EPSKTRIGWIGIGIMGSAMVSHILAAGYSVTVYARDLRKTKDLQTKG 56


>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +2

Query: 173 GDEYNFVTSSTFKTTEMKFKP-----GEEFEEERADGVKVKSVCTFEGNILKQI 319
           G E   VTS TFKT +   +P     GE FE    DG K+       G+++ QI
Sbjct: 575 GVEAEVVTSLTFKTNKRTSQPFGMTAGEHFELNE-DGYKIVGFHGKAGDLVHQI 627


>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +2

Query: 173 GDEYNFVTSSTFKTTEMKFKP-----GEEFEEERADGVKVKSVCTFEGNILKQI 319
           G E   VTS TFKT +   +P     GE FE    DG K+       G+++ QI
Sbjct: 575 GVEAEVVTSLTFKTNKRTSQPFGMTAGEHFELNE-DGYKIVGFHGKAGDLVHQI 627


>At1g27040.2 68414.m03296 nitrate transporter, putative contains
           Pfam profile: PF00854 POT family; similar to nitrate
           transporter (NTL1) GI:3377517 [Arabidopsis thaliana]
          Length = 563

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 62  KMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKE 172
           K+T SE     ++ +GVGL+    A AV   VEL+++
Sbjct: 393 KVTKSEIGITHLQRIGVGLVLSIVAMAVAALVELKRK 429


>At1g27040.1 68414.m03297 nitrate transporter, putative contains
           Pfam profile: PF00854 POT family; similar to nitrate
           transporter (NTL1) GI:3377517 [Arabidopsis thaliana]
          Length = 567

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 62  KMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKE 172
           K+T SE     ++ +GVGL+    A AV   VEL+++
Sbjct: 397 KVTKSEIGITHLQRIGVGLVLSIVAMAVAALVELKRK 433


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,246,242
Number of Sequences: 28952
Number of extensions: 209043
Number of successful extensions: 603
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)