Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J14
         (539 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008352-1|AAH08352.1|  421|Homo sapiens KIAA1909 protein protein.     29   7.9  
AB067496-1|BAB67802.2| 1287|Homo sapiens KIAA1909 protein protein.     29   7.9  

>BC008352-1|AAH08352.1|  421|Homo sapiens KIAA1909 protein protein.
          Length = 421

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 453 SSLKKTGKYVNSCVLTASLDNRY 521
           SSLK   K+V+SC LTA LD  +
Sbjct: 227 SSLKAVHKFVDSCQLTADLDGSF 249


>AB067496-1|BAB67802.2| 1287|Homo sapiens KIAA1909 protein protein.
          Length = 1287

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 453 SSLKKTGKYVNSCVLTASLDNRY 521
           SSLK   K+V+SC LTA LD  +
Sbjct: 329 SSLKAVHKFVDSCQLTADLDGSF 351


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,572,964
Number of Sequences: 237096
Number of extensions: 1619204
Number of successful extensions: 6436
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6436
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)