Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J12
         (405 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    27   0.11 
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   7.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   9.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   9.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   9.3  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 0.11
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -3

Query: 184 CRGDISAYYDVIVQFVIFQ*CTSIFLRYRRSLYNQQSQH---CDGQNHLIRLDPG 29
           C  D+S ++D + Q VI+  C  +  R  R L N  +      DG N +++   G
Sbjct: 132 CDVDVSTFFDQLGQEVIYTACVGLLERAFRCLGNNLTAFLTTLDGVNDVVQHQSG 186


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 403 SLRLINFTLFTQLNPAKMYWE 341
           S+  +N T+    +P K +WE
Sbjct: 136 SVNDVNMTITELTDPVKEFWE 156


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 257  PTSNKEPSSDYAV 295
            P++   PSSDY++
Sbjct: 1909 PSTQNNPSSDYSI 1921


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 257  PTSNKEPSSDYAV 295
            P++   PSSDY++
Sbjct: 1905 PSTQNNPSSDYSI 1917


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 201 SSIVILAAETYRPI 160
           +++VIL+  TYRP+
Sbjct: 54  NALVILSVFTYRPL 67


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 201 SSIVILAAETYRPI 160
           +++VIL+  TYRP+
Sbjct: 54  NALVILSVFTYRPL 67


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 201 SSIVILAAETYRPI 160
           +++VIL+  TYRP+
Sbjct: 54  NALVILSVFTYRPL 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,843
Number of Sequences: 438
Number of extensions: 1699
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)