Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J11
         (91 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   1.8  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               20   3.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   4.1  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like
          GPCR protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 75 PGTIVIMIFMLCGFHSNLT 19
          P TI+ MI  + G   N+T
Sbjct: 42 PLTIIYMIIFVTGIFGNIT 60


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 69 TIVIMIFMLC 40
          TIVI++F LC
Sbjct: 3  TIVILLFTLC 12


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 35  KPHNIKIIITMVP 73
           K  N+K+I+ +VP
Sbjct: 108 KKQNLKVILDLVP 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,753
Number of Sequences: 438
Number of extensions: 182
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 11
effective length of database: 141,525
effective search space used:  2547450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)