Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J10
(484 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38596| Best HMM Match : EGF (HMM E-Value=3.7e-06) 32 0.28
SB_49925| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_56740| Best HMM Match : RBD (HMM E-Value=0.21) 29 1.5
SB_24266| Best HMM Match : Transposase_35 (HMM E-Value=1.2) 29 1.5
SB_12987| Best HMM Match : Transposase_35 (HMM E-Value=1.2) 29 1.5
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_42801| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_42142| Best HMM Match : Transposase_35 (HMM E-Value=1.2) 29 1.5
SB_31167| Best HMM Match : Transposase_35 (HMM E-Value=1.2) 29 1.5
SB_21536| Best HMM Match : RVT_1 (HMM E-Value=0.0043) 29 1.5
SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4) 29 2.0
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_42681| Best HMM Match : Transposase_35 (HMM E-Value=1.2) 29 2.7
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 29 2.7
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34777| Best HMM Match : VWA (HMM E-Value=0) 29 2.7
SB_57731| Best HMM Match : Vicilin_N (HMM E-Value=8.2) 28 4.6
SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_41768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_36336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_35096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_24849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_16271| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_13227| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_10161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_58110| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_56490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_50392| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_31170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_30092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_20989| Best HMM Match : CRA_rpt (HMM E-Value=7.1) 28 4.6
SB_16467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_15251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_7233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_1101| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_945| Best HMM Match : RecR (HMM E-Value=0.52) 28 4.6
SB_41885| Best HMM Match : SPC12 (HMM E-Value=3.4) 27 6.1
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 27 6.1
SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 6.1
>SB_38596| Best HMM Match : EGF (HMM E-Value=3.7e-06)
Length = 605
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRESFRDL 219
C C G V+D EH+L+ CPA++ DL
Sbjct: 522 CLVCQTGKVEDEEHSLLECPAYKNDRDDL 550
>SB_49925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRESFRDL 219
C C G V+D EH L+ CPA++ DL
Sbjct: 102 CLVCQTGKVEDDEHFLLECPAYKNDRDDL 130
>SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 1170 CLVCQTGKVEDEEHFLLECPAYKD 1193
>SB_56740| Best HMM Match : RBD (HMM E-Value=0.21)
Length = 320
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 137 CLVCQTGKVEDEEHFLLECPAYKD 160
>SB_24266| Best HMM Match : Transposase_35 (HMM E-Value=1.2)
Length = 151
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 65 CLVCQTGKVEDEEHFLLECPAYKD 88
>SB_12987| Best HMM Match : Transposase_35 (HMM E-Value=1.2)
Length = 219
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 160 CLVCQTGKVEDEEHFLLECPAYKD 183
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 206 CLVCQTGKVEDEEHFLLECPAYKD 229
>SB_42801| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 106 CLVCQTGKVEDEEHFLLECPAYKD 129
>SB_42142| Best HMM Match : Transposase_35 (HMM E-Value=1.2)
Length = 265
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 179 CLVCQTGKVEDEEHFLLECPAYKD 202
>SB_31167| Best HMM Match : Transposase_35 (HMM E-Value=1.2)
Length = 169
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 132 CLVCQTGKVEDEEHFLLECPAYKD 155
>SB_21536| Best HMM Match : RVT_1 (HMM E-Value=0.0043)
Length = 831
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWRE 234
C C G V+D EH L+ CPA+++
Sbjct: 421 CLVCQTGKVEDEEHFLLECPAYKD 444
>SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4)
Length = 402
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T V R P+ HD+R
Sbjct: 295 RDRQQSRRTACSPPHSTTDREDGTLVERHAPQAPRSGPGHDKR 337
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 253 TTNVCSTSSTTPPAQ*LQHGESSLPS 330
+++ CSTSSTTP +HG+ S PS
Sbjct: 1585 SSSSCSTSSTTPKKSVSKHGKLSEPS 1610
>SB_42681| Best HMM Match : Transposase_35 (HMM E-Value=1.2)
Length = 144
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWR 237
C C G V+D EH L+ CPA++
Sbjct: 57 CLVCQTGKVEDKEHFLLECPAYK 79
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 244 RGGSPSGTWRPTWVGSSPCRRS*GRW 167
RGG G WRP W P R RW
Sbjct: 864 RGGDKPGAWRPKWQREEPDRGG-DRW 888
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 305 CNHCAGGVVDDVEHTLVVCPAWR 237
C C G V+D EH L+ CPA++
Sbjct: 129 CLVCRTGKVEDEEHFLLECPAYK 151
>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1268
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 157 ELPTIALTSDGKERTLPTSDAKSLKDSLHA-GHTTNVCSTSSTTPPAQ*LQHGESSL-PS 330
E PT+ +TSDG+ T+ DA+S + G T + S T Q H +S+ PS
Sbjct: 295 ESPTVTVTSDGEHTTVKVLDAQSPTPKVTINGKTNDGKSADGNTKSQQNTTHDITSVDPS 354
Query: 331 V 333
+
Sbjct: 355 L 355
>SB_57731| Best HMM Match : Vicilin_N (HMM E-Value=8.2)
Length = 196
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 132 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 174
>SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_41768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_36336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 59 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 101
>SB_35096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_24849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 32 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 74
>SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_16271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 19 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 61
>SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_13227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_10161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_58110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_56490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_50392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 19 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 61
>SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 298 TVPAESSTTS-STRWSCVPRGGSPSGTWRPTWVGSSP 191
T P ES TS ST C R SP T RP+ GS+P
Sbjct: 16 TAPTESRATSLSTAGFCGRRSRSPPST-RPSRQGSAP 51
>SB_31170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_30092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_20989| Best HMM Match : CRA_rpt (HMM E-Value=7.1)
Length = 138
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_16467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_15251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_7233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 65 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 107
>SB_1101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 135 RDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
RD + S R A PH ED T R P+ HD+R
Sbjct: 22 RDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSGPGHDKR 64
>SB_945| Best HMM Match : RecR (HMM E-Value=0.52)
Length = 279
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 159 AADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQRVLDVVDDS 287
A D H+ R D G +V E PP +QRVLDV+++S
Sbjct: 135 AEDDANHKLRMFLDIDTFGVRVDES-PPYSRSEQRVLDVLNES 176
>SB_41885| Best HMM Match : SPC12 (HMM E-Value=3.4)
Length = 171
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 210 VGRQVPEGLPPRGTHDQRVLDVVD 281
+G Q+P PPRGTH Q ++ +
Sbjct: 145 MGPQIPRIPPPRGTHSQPTKEITN 168
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 262 RWSCVPRGGSPSGTWR 215
RW C+ R SP G WR
Sbjct: 955 RWYCISRMASPRGDWR 970
>SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 785
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 335 GTLG-RELSPCCNHCAGGVVDDVEHTLVVCPAWRESFRDLASDVGRVLSLPSLV 177
GT+ R +P C++C GG + T+ C + + + L+S VG V+ + S V
Sbjct: 552 GTISPRYAAPSCSNCTGGRTPNAARTM--CISEKMADNQLSSAVGVVIIVLSAV 603
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,710,327
Number of Sequences: 59808
Number of extensions: 219995
Number of successful extensions: 816
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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