Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J10
         (484 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    39   8e-05
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    34   0.002
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    34   0.002
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    33   0.004
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    33   0.007
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    30   0.036
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    30   0.048
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.1  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   5.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   5.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.3  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   9.6  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    22   9.6  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
            protein.
          Length = 973

 Score = 39.1 bits (87), Expect = 8e-05
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = -3

Query: 314  SPCCNHCAGGVVDDVEHTLVVCPAWRESFRDLASDVGRVLSLPSLVRAMVGSSRAWAVVS 135
            SP C  C   +V+  EH L  CP + E   ++    G  ++  +L   M+ ++  W V++
Sbjct: 905  SPDCPACVS-IVESTEHVLFHCPRFAEERHEITVKCGTTINGTNLTELMLKNAGTWEVIA 963

Query: 134  SCCEAIML 111
            +   +I+L
Sbjct: 964  NGMRSILL 971


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 34.3 bits (75), Expect = 0.002
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -3

Query: 314  SPCCNHCAGGVVDDVEHTLVVCPAWRESFRDLASDVGRVLSLPSLVRA-MVGSSRAWAVV 138
            SP C  C G VV+ VEH +  CP + E   +L   V     LP  + A M+ S   W   
Sbjct: 953  SPACPRCPG-VVEGVEHVMFECPRFAEVRSELLDGV-----LPETLEAHMLQSPTNW--- 1003

Query: 137  SSCCEA 120
            S+ CEA
Sbjct: 1004 SNVCEA 1009


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 34.3 bits (75), Expect = 0.002
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -3

Query: 329  LGRELSPCCNHCAGGVVDDVEHTLVVCPAWRESFRDLASDVGRVLSLPSLVR-AMVGSSR 153
            +G   SP C  C G V +  EH +  CP + E  + L  +       P  ++  ++ S  
Sbjct: 957  MGFTPSPDCIRCTG-VPETAEHAMFECPRFAEIRQKLLGEANTDAITPETLQFHLLQSQE 1015

Query: 152  AWAVVSSCCEAIMLA-KEDAEQERERAA 72
             W+ ++   + I  A + D  +ER R A
Sbjct: 1016 KWSRIAEAAKQITSALQRDWNEERARLA 1043


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 33.5 bits (73), Expect = 0.004
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 314  SPCCNHCAGGVVDDVEHTLVVCPAWRESFRDLAS-DVGRVLSLPSLVRAMVGSSRAWAVV 138
            SP C  C G V + V H L  CP + E  RDL    V   ++  +L + ++ SS +W  +
Sbjct: 944  SPECPACTGSV-ESVAHVLFYCPRFAEVRRDLLEMGVDGSITGENLGQMLLKSSDSWTRI 1002

Query: 137  SSCCEAI 117
                  I
Sbjct: 1003 QEAARRI 1009


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 32.7 bits (71), Expect = 0.007
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = -3

Query: 314  SPCCNHCAGGVVDDVEHTLVVCPAWRESFRDLASD-VGRVLSLPSLVRAMVGSSRAWAVV 138
            SP C  C+G V +  EH +  CP + E  + L  + +   +   +L + ++  + +W+ +
Sbjct: 938  SPDCQRCSG-VPETAEHAMFECPRFAEVRQQLLGEGITDPVRPENLQQHLLRDAESWSRI 996

Query: 137  SSCCEAIMLAKEDA-EQERER-AAHPN 63
                + I  + + A + ER   AAH N
Sbjct: 997  CEAAKRITASLQQAWDDERAALAAHGN 1023


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 30.3 bits (65), Expect = 0.036
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -3

Query: 314  SPCCNHCAGGVVDDVEHTLVVCPAWRESFRDLASDVGRVLSLP-SLVRAMVGSSRAWAVV 138
            SP C  C G V +  EH +  CP +  +  +L   V     +P +L+  M+ S   W+ V
Sbjct: 1013 SPDCTRCPG-VAESAEHAMFECPRFDSTRTELLHGV-----VPETLLEHMLQSPENWSNV 1066

Query: 137  SSCCEAIMLA-KEDAEQERERAA 72
                + I  A ++D ++ R   A
Sbjct: 1067 CEATKRITSALQQDWDETRRELA 1089


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 0.048
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -3

Query: 320  ELSPCCNHCAGGVVDDVEHTLVVCP 246
            E SP C  C G  V+DVEH L  CP
Sbjct: 933  EGSPNCPEC-GDAVEDVEHVLFHCP 956


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 238 LHAGHTTNVCSTSSTTPPAQ*LQHGESSLPS 330
           LH  HT + CST  +T       +G+ + PS
Sbjct: 251 LHPYHTDSDCSTQDSTSAPSPATYGDIASPS 281



 Score = 23.0 bits (47), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 138 DNRPSPRAADHRPHERRQGEDPT 206
           ++R SP++A   PH     + PT
Sbjct: 4   EDRCSPQSAPSPPHHHHSSQSPT 26


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 238 LHAGHTTNVCSTSSTTPPAQ*LQHGESSLPS 330
           LH  HT + CST  +T       +G+ + PS
Sbjct: 251 LHPYHTDSDCSTQDSTSAPSPATYGDIASPS 281



 Score = 23.0 bits (47), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 138 DNRPSPRAADHRPHERRQGEDPT 206
           ++R SP++A   PH     + PT
Sbjct: 4   EDRCSPQSAPSPPHHHHSSQSPT 26


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = -3

Query: 278  DDVEHTLVVCPAWRESFRDLASDVGRVLSLPSLVRAMVGSSRAWAVVSSCCEAIM 114
            + V+H +  CP + E    L       +   +LV+ M+  + +W   ++    I+
Sbjct: 979  ETVDHVMFHCPRFAEERLQLNESCRVEVGCSNLVQVMLQHTDSWEAAATTMRLIL 1033


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 177 HERRQGEDPTHVGRQVPEGLPPRGTHDQR 263
           HE  +  DP H  R +   L P  + DQR
Sbjct: 24  HEAEEEYDPMHPQRFLFADLAPTASTDQR 52


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 433 NKYGSINHNCMCLHKV 480
           N+      NCMC HKV
Sbjct: 599 NRPADCGANCMCTHKV 614


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +3

Query: 189 QGEDPTHVGRQVPEGLPPRGTHDQRVLDVVDDSAGTVITT 308
           Q ED   +     +G+ P G  D    + +DD    +I T
Sbjct: 674 QQEDMASIEDVSLDGMIPEGPKDDNTRETIDDQDRRMIET 713


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 457 NCMCLHKV 480
           NCMC HKV
Sbjct: 607 NCMCTHKV 614


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +3

Query: 111 EHDGFATGRDNRPSPRAADHRPHERRQGEDPTHVGRQVP 227
           +H    T     P P     +P+   Q   P H G+Q P
Sbjct: 183 QHMAMYTNAGGGP-PGVTQQQPNMMHQQPPPLHQGQQAP 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,978
Number of Sequences: 2352
Number of extensions: 6235
Number of successful extensions: 31
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)