Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J10
         (484 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029071-1|AAH29071.2|  242|Homo sapiens hypothetical protein MG...    31   2.8  
BC130007-1|AAI30008.1|  967|Homo sapiens zinc finger with KRAB a...    30   3.7  
AY393614-1|AAR02488.1|  158|Homo sapiens immunoglobulin heavy ch...    30   4.9  
AK075037-1|BAC11367.1|  298|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>BC029071-1|AAH29071.2|  242|Homo sapiens hypothetical protein
           MGC45491 protein.
          Length = 242

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -1

Query: 289 AESSTTSSTRWSCVPRGGSPSGTWRPTWVGSSPCRRS*GRWSAALGLGRLSLPVAKPS 116
           A+    S+T W+C+ R  +P    +PT +     RRS G+ SA L  GR S+   K S
Sbjct: 11  AQGGGPSATEWACILRRKTPRHK-QPTLLMVRASRRS-GKTSAVLKAGRQSVSGRKNS 66


>BC130007-1|AAI30008.1|  967|Homo sapiens zinc finger with KRAB and
           SCAN domains 2 protein.
          Length = 967

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +3

Query: 108 REHDGFATGRDNRPSPRAADHRPHERRQGEDPTHVGRQVPEGLPPRGTHDQRVLD 272
           +E D     R + PSP   +  P   RQ      V  Q P G  P  T  + V++
Sbjct: 577 KEMDALINSRASAPSPSTPEEVPSPSRQERGGIEVEPQDPTGWEPEETSQEAVIE 631


>AY393614-1|AAR02488.1|  158|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 158

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 271 SSTRWSCVPRGGSPSGTWRPTWVGSSP 191
           SS + SC   GG+PS ++  TWV  +P
Sbjct: 12  SSVKVSCKASGGNPSNSYAFTWVRQAP 38


>AK075037-1|BAC11367.1|  298|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90556 fis, clone OVARC1000956, weakly similar to
           SKIN SECRETORY PROTEIN XP2 PRECURSOR. ).
          Length = 298

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 GFATGRDNRPSPRAADHRPHERRQGEDPTHV 212
           G AT     P P A D    ER +GE PT+V
Sbjct: 197 GPATAHSGSPGPVAVDSPGPERPRGESPTYV 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,981,979
Number of Sequences: 237096
Number of extensions: 1024072
Number of successful extensions: 3899
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3899
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)