Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J09
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   3.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.0  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   3.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   9.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   9.1  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = -2

Query: 393 YFIETYSPSC----YSYNINWNKTTSAASTPTLFIMKLVKKTEAH 271
           Y   TY P+C     S+   W K  +A +  TL +  L+  +  H
Sbjct: 247 YLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQH 291


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 64  EKLKKVISELNGKNV 108
           +KLKK + E  GKN+
Sbjct: 154 DKLKKKLEEWTGKNI 168


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 64  EKLKKVISELNGKNV 108
           +KLKK + E  GKN+
Sbjct: 169 DKLKKKLEEWTGKNI 183


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 64  EKLKKVISELNGKNV 108
           +KLKK + E  GKN+
Sbjct: 57  DKLKKKLEEWTGKNI 71


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 22  VEKILSSVGIEADSEKLKKVISELNGK 102
           V K +  +GI    +K+K ++ EL  K
Sbjct: 28  VGKGMKVIGIAPQVDKMKTLVEELKSK 54


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 393 YFIETYSPSCYSYNINW 343
           Y I+ Y P C    ++W
Sbjct: 244 YLIQIYIPCCMLVIVSW 260


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 393 YFIETYSPSCYSYNINW 343
           Y I+ Y P C    ++W
Sbjct: 244 YLIQIYIPCCMLVIVSW 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,729
Number of Sequences: 438
Number of extensions: 1092
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)