Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J04
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 52 3e-07
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 52 3e-07
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 31 0.57
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 30 0.99
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 2.3
AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical ... 28 5.3
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 7.0
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 7.0
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 7.0
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.0
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.0
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.0
U53141-1|AAA96103.1| 322|Caenorhabditis elegans Serpentine rece... 27 9.2
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPS-------LKMEHDGECQGAKLASLHPCIC 390
C EY+PVC SNG+ N+C L+ + ++ + L ++DGEC + C
Sbjct: 872 CPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-----CRIENCDI 926
Query: 389 TREKDPVCGSDGVTYSNLCLL---KCASL--SKPSLSIEHTGPCDN 267
+ PVC ++GVT++N+CL+ C + +K ++ + + G C N
Sbjct: 927 S-VFSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCN 971
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSL--ECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKD 375
C Y P+CG+NG T+ N CSL E + ++++ + G C C +
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN--------CPSDFS 823
Query: 374 PVCGSDGVTYSNLC 333
PVC S G T+ N+C
Sbjct: 824 PVCDSKGSTHQNIC 837
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Frame = -1
Query: 554 CYCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKD 375
C C PVCG++ TY N C L C Q+ L ++G C K C +
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK-------ECEKVGT 71
Query: 374 PVCGSDGVTYSNLC---LLKCASLSKPSLSIE--HTGPCDN 267
P+C + G T+ N C +C LS+ H G C +
Sbjct: 72 PICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSS 112
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPS----LKMEHDGECQGAKLASLHPCICTRE 381
C + PVC S G + N C ++ I S + + + C +K A PC T +
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCI-SKEACQMPC--TDD 593
Query: 380 KDPVCGSDGVTYSNLCLLKCASLSKPSLSIEHTGPC 273
K P+C SD TY NLC + L + G C
Sbjct: 594 KHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKC 629
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKC---SLECTQKIIPSLKME--HDGECQGAKLASLHPCICTR 384
C P+C + G+T+ N C +C K L + H G C H C T
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCN--HNCTNT- 122
Query: 383 EKDPVCGSDGVTYSNLCLLK 324
E DPVC ++G Y NLC+ +
Sbjct: 123 EFDPVCDTNGSVYRNLCVFQ 142
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -1
Query: 527 VCGSNGKTYANKCSLE---CTQKIIP--SLKMEHDGECQGAKLASLHPCICTREKDPVCG 363
VC S G+T+ N C + C + I +L + H GEC LAS C + PVC
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC--CALAS-----CPKTGQPVCD 1082
Query: 362 SDGVTYSNLC 333
S G T+ +LC
Sbjct: 1083 SRGRTHDSLC 1092
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = -1
Query: 392 CTREKDPVCGSDGVTYSNLCLLK---CASLSKPSLSIEHTGP-CDNN 264
C DP+CG++GVT++N C L+ C S + ++ + +TG CD N
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICES-ANSTIEVAYTGMCCDTN 817
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLE---C-TQKIIPS-LKMEHDGECQGAKLASLHPCICTR 384
C + PVC + +T+ N C + C KI S + + H G C+ K + C
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCI-TCPKDE 315
Query: 383 EKDPVCGSDGVTYSNLC 333
+K P+C + +T+ LC
Sbjct: 316 KKIPICDNRNMTHPTLC 332
Score = 35.5 bits (78), Expect = 0.026
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQ----KIIPSLKMEHDGECQGAKLASLHPCICTRE 381
C + PVC T+ N C Q ++ +L + + GEC L P
Sbjct: 974 CDEDKTPVCDGT-ITHPNICRFRIAQCEAERVNKTLSIAYSGEC------CLLPKGECES 1026
Query: 380 KDPVCGSDGVTYSNLCLL---KC--ASLSKPSLSIEHTGPC 273
VC S+G T+ N C+ +C ++S+ +L+I HTG C
Sbjct: 1027 SGAVCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 34.3 bits (75), Expect = 0.061
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Frame = -1
Query: 530 PVCGSNGKTYANKCSL----------ECTQKIIPSLKMEHDGECQGAKLASLHPCICTRE 381
P+C + T+ CS E ++++ +K H+ Q + P C+R+
Sbjct: 319 PICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCSRD 378
Query: 380 KDPVCGSDGVTYSNLCLLKCASLSKPSLSI-----EHTGPCDNNR 261
PVC T+ NLC + + + L I + PC NR
Sbjct: 379 VKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPCVKNR 423
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 369
C PVC S G+T+ + C ++ I + ++ + P CT E +
Sbjct: 1073 CPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQ-GKCCPAGCTDELSVI 1131
Query: 368 CGSDGVTYSNLCL--LKCASLSKPSLSIEHTGPC 273
C Y N C LK + + + PC
Sbjct: 1132 CDQHENIYRNSCYFNLKACETWRRTQDVLLATPC 1165
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = -1
Query: 392 CTREKDPVCGSDGVTYSNLCLLK---CA--SLSKPSLSIEHTGPC 273
C + DPVC + T+ N+C K C + + I H+G C
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGAC 301
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Frame = -1
Query: 557 PCYCTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHPC--- 396
P C PVC +NG+T+ N+C ++ C K + +K++H G C A+ C
Sbjct: 394 PNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKP 451
Query: 395 ---------------ICTREKDPVCGSDGVTYSNLCLLK-CASLSKPSLSIEHTGPCD 270
CT E VCGSDG TYSN C L+ A +++ ++ +++ C+
Sbjct: 452 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 45.2 bits (102), Expect = 3e-05
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD--GEC- 429
CT+ A VCG++GKTY N+C L+ C + P KME G C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 428 -QGAKLASLH-PCICTREKDPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPC 273
+ + A P C PVC ++G T+ N C +K S +K + ++H G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 44.4 bits (100), Expect = 6e-05
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA------------- 411
CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 468 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVG 527
Query: 410 --SLHPCIC--------TREKDPVCGSDGVTYSNLC-LLKCASLSKPSLSIEHTGPCD 270
C C E VCG+DGVTYS+ C + K A + G CD
Sbjct: 528 ENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCD 585
Score = 41.5 bits (93), Expect = 4e-04
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Frame = -1
Query: 545 TLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLK-MEHDGECQGAKLASLHPC------ 396
++E +PVC S+G Y + C L C K ++K C G K + C
Sbjct: 254 SVESSPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDR 313
Query: 395 --------ICTREKDPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPCD 270
CT VCG+DG TY N C LK A+ + + + G CD
Sbjct: 314 RPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Frame = -1
Query: 557 PCYCTLEYAPVCGSNGKTYANKCSLE---CTQK--IIPSLKMEHDG----ECQGAKLASL 405
P Y E VCG++G TY+++C ++ C Q ++ + + + D +C+ +
Sbjct: 541 PSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRS 600
Query: 404 HPCICTRE--KDP-----VCGSDGVTYSNLCLLKCASLSK 306
C+C+ +P +CG +GV Y +LC L+ AS K
Sbjct: 601 GVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 640
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1
Query: 371 VCGSDGVTYSNLCLLK 324
VCGSDG TYSNLC LK
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 33.1 bits (72), Expect = 0.14
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 24/97 (24%)
Frame = -1
Query: 533 APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKL----------------AS 408
A +CG NG Y + C L+ QK P +M C +K A+
Sbjct: 617 ARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDFKVRRPCACYFGAT 675
Query: 407 LHPCICT------REKDPVCGSDGVTYSNLCLLKCAS 315
H CT P+CGSDG+ Y+N C L S
Sbjct: 676 CHNWACTCPTCNLSSNYPICGSDGIVYNNQCHLNTIS 712
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -1
Query: 392 CTREKDPVCGSDGVTYSNLCLLKCAS--LSKPS--LSIEHTGPC 273
C D VCGSD V+YS+ C L S L+K L + GPC
Sbjct: 169 CRVVTDVVCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 212
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 527 VCGSNGKTYANKCSLE 480
VCGS+G TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 554 CYCTLEYAPVCGSNGKTYANKCSL 483
C + Y P+CGS+G Y N+C L
Sbjct: 686 CNLSSNY-PICGSDGIVYNNQCHL 708
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Frame = -1
Query: 557 PCYCTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHPC--- 396
P C PVC +NG+T+ N+C ++ C K + +K++H G C A+ C
Sbjct: 402 PNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKP 459
Query: 395 ---------------ICTREKDPVCGSDGVTYSNLCLLK-CASLSKPSLSIEHTGPCD 270
CT E VCGSDG TYSN C L+ A +++ ++ +++ C+
Sbjct: 460 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 45.2 bits (102), Expect = 3e-05
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD--GEC- 429
CT+ A VCG++GKTY N+C L+ C + P KME G C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 428 -QGAKLASLH-PCICTREKDPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPC 273
+ + A P C PVC ++G T+ N C +K S +K + ++H G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 44.4 bits (100), Expect = 6e-05
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA------------- 411
CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 476 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVG 535
Query: 410 --SLHPCIC--------TREKDPVCGSDGVTYSNLC-LLKCASLSKPSLSIEHTGPCD 270
C C E VCG+DGVTYS+ C + K A + G CD
Sbjct: 536 ENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCD 593
Score = 41.5 bits (93), Expect = 4e-04
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Frame = -1
Query: 545 TLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLK-MEHDGECQGAKLASLHPC------ 396
++E +PVC S+G Y + C L C K ++K C G K + C
Sbjct: 262 SVESSPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDR 321
Query: 395 --------ICTREKDPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPCD 270
CT VCG+DG TY N C LK A+ + + + G CD
Sbjct: 322 RPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Frame = -1
Query: 557 PCYCTLEYAPVCGSNGKTYANKCSLE---CTQK--IIPSLKMEHDG----ECQGAKLASL 405
P Y E VCG++G TY+++C ++ C Q ++ + + + D +C+ +
Sbjct: 549 PSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRS 608
Query: 404 HPCICTRE--KDP-----VCGSDGVTYSNLCLLKCASLSK 306
C+C+ +P +CG +GV Y +LC L+ AS K
Sbjct: 609 GVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 648
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1
Query: 371 VCGSDGVTYSNLCLLK 324
VCGSDG TYSNLC LK
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -1
Query: 392 CTREKDPVCGSDGVTYSNLCLLKCAS--LSKPS--LSIEHTGPC 273
C D VCGSD V+YS+ C L S L+K L + GPC
Sbjct: 177 CRVVTDVVCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 220
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 527 VCGSNGKTYANKCSLE 480
VCGS+G TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -1
Query: 554 CYCTLEYAPVCGSNGK---TYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTR 384
C C E PVC G TY+NKC +C Q+ L + ++G C A+ C
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR-------YCNM 77
Query: 383 EKDPVCGSDGVTYSNLC 333
+ PVC S+G Y +C
Sbjct: 78 FEQPVC-SEGQMYQTVC 93
Score = 44.0 bits (99), Expect = 8e-05
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSL---ECTQK--IIPSLKMEHDGECQGAKLASLHPCICTR 384
C E+ PVC G+T+AN C+ +C K + SL++++ G C C +
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC------CEDMCSAGQ 178
Query: 383 EKDPVCGSDGVTYSNLC---LLKC----ASLSKPSLSIEHTGPC 273
VC S+G T++++C + KC + K L I GPC
Sbjct: 179 TSLTVCDSEGNTHTDICSFYIAKCRQMRRGIGKKRLQIAGVGPC 222
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 398 CICTREKDPVCGSDG---VTYSNLCLLKCASLSKPSLSIEHTGPCDNNR 261
C C E DPVC +G TYSN C+ +CA +K L + + G C + R
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR 73
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.57
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 554 CYCTLEYAPVCGSN-GKTYANKCSLECT 474
C+C +E+ PVC N G Y + C CT
Sbjct: 457 CHCKMEWNPVCDRNTGHMYYSACHAGCT 484
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 30.3 bits (65), Expect = 0.99
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = -1
Query: 530 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGA-KLASLHPCICTREKDPVCGSDG 354
P+CG N NK + Q + + E+D EC + + L C C G
Sbjct: 140 PICGKNCFVALNKNGCQDCQCLWLAQDCENDEECSASNQYCDLGKCNCRDGYQQNMSKSG 199
Query: 353 VTYSNLCLLKCASLSKPSLS--IEHTGPCDNN 264
N + SKP LS +E G CD N
Sbjct: 200 AIPENE-FKRNKRESKPRLSERLEWPGVCDKN 230
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -1
Query: 461 PSLKMEHDGECQGAKLASLHPCICTREKDPV-CGSD-GVTYSNLCLLKCASLSKPSLSIE 288
P ++ H G C KL + C C + K V CGSD V +C + + I
Sbjct: 333 PCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSDQEVMCETVCGKQLSCGQHNCERIC 392
Query: 287 HTGPC 273
H+G C
Sbjct: 393 HSGDC 397
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 369
CTLE P C +C+ +C Q P + + CQ +A P I T E P
Sbjct: 226 CTLECQPTCQQAVPQCQQQCAPQCQQPSAPQCQ-QCQSACQSPVVA---PQIITLEVVPQ 281
Query: 368 C 366
C
Sbjct: 282 C 282
>AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical
protein Y45F3A.4 protein.
Length = 147
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 398 CICTREKDPVCGSDGV--TYSNLCLLKCASLSKPSLSIEHT 282
C CT+E + V +DGV T + CL+ L PS+ I +T
Sbjct: 27 CKCTKESETVTCTDGVCETENGSCLM----LDHPSMGIHYT 63
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/79 (21%), Positives = 27/79 (34%)
Frame = -1
Query: 551 YCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDP 372
+C LE P C +C+ +C Q P +CQ + + C ++ P
Sbjct: 203 HCNLECQPTCQQAVSQCQQQCAPQCQQPSAP--------QCQQCQSSCQQTQQCQQQCIP 254
Query: 371 VCGSDGVTYSNLCLLKCAS 315
+C C C S
Sbjct: 255 LCNQPSAPACQQCQSACQS 273
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 369
CTL AP C +T + +C Q+ IP + +CQ + A P + + +
Sbjct: 281 CTLPSAPAC-QQCQTSCQQTQ-QCQQQCIPQCQQPAAPQCQQCQSACQSPVVAPQIVTVI 338
Query: 368 CGSDGVTYSNLCLLKC 321
V+ S C+ +C
Sbjct: 339 L-EPSVSQSAQCVPQC 353
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 369
CTL AP C +T + +C Q+ IP + +CQ + A P + + +
Sbjct: 282 CTLPSAPAC-QQCQTSCQQTQ-QCQQQCIPQCQQPAAPQCQQCQSACQSPVVAPQIVTVI 339
Query: 368 CGSDGVTYSNLCLLKC 321
V+ S C+ +C
Sbjct: 340 L-EPSVSQSAQCVPQC 354
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 369
CTL AP C +T + +C Q+ IP + +CQ + A P + + +
Sbjct: 197 CTLPSAPAC-QQCQTSCQQTQ-QCQQQCIPQCQQPAAPQCQQCQSACQSPVVAPQIVTVI 254
Query: 368 CGSDGVTYSNLCLLKC 321
V+ S C+ +C
Sbjct: 255 L-EPSVSQSAQCVPQC 269
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 369
CTL AP C +T + +C Q+ IP + +CQ + A P + + +
Sbjct: 197 CTLPSAPAC-QQCQTSCQQTQ-QCQQQCIPQCQQPAAPQCQQCQSACQSPVVAPQIVTVI 254
Query: 368 CGSDGVTYSNLCLLKC 321
V+ S C+ +C
Sbjct: 255 L-EPSVSQSAQCVPQC 269
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -1
Query: 548 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 369
CTL AP C +T + +C Q+ IP + +CQ + A P + + +
Sbjct: 197 CTLPSAPAC-QQCQTSCQQTQ-QCQQQCIPQCQQPAAPQCQQCQSACQSPVVAPQIVTVI 254
Query: 368 CGSDGVTYSNLCLLKC 321
V+ S C+ +C
Sbjct: 255 L-EPSVSQSAQCVPQC 269
>U53141-1|AAA96103.1| 322|Caenorhabditis elegans Serpentine
receptor, class x protein117 protein.
Length = 322
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 196 RMFKIINIQFLMLNFSYILERAL--IFLIKMKNK*YKNVK 83
++F ++ QFL L+FS + RAL + KM + K V+
Sbjct: 251 KLFPVLFFQFLTLSFSMVFLRALEGFIMFKMNERIDKGVR 290
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = -1
Query: 536 YAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCIC--TREKDPVCG 363
+ C G Y N +++C + S++ + ++S C T+E PV
Sbjct: 85 FTVTCNELGAIYPNPSNIDCGE----SVQERKIRDTTNEMVSSCKVCFGRGTKECQPVTN 140
Query: 362 SDGVTYSNLCLLK 324
SDGV C+ K
Sbjct: 141 SDGVVQGYKCVCK 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,603,609
Number of Sequences: 27780
Number of extensions: 263047
Number of successful extensions: 717
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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