Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J04
         (560 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   6e-04
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.9  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   6.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   6.4  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   8.5  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    21   8.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 34.7 bits (76), Expect = 6e-04
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 548 CTLEYAPVCGSNGKTYANKCSL 483
           C   + PVC SNGK YAN C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131



 Score = 30.3 bits (65), Expect = 0.014
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -1

Query: 434 ECQGAKLASLHPCICTRE----KDPVCGSDGVTYSNLCLLKCAS 315
           EC+ +  +++  C+C R+      PVC S+G  Y+N C L  A+
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAA 135


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 245 N*NHSNKYIVTDAN*RENV*NNKYSVFNVEFQL 147
           N    N+Y++  ++  +NV NN  ++ +V FQ+
Sbjct: 368 NNTQRNEYLLALSDRNQNVLNNDLNLEHVNFQI 400


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 376 SFSRVHIHGCKL 411
           S   +H+HGCK+
Sbjct: 93  SLHELHVHGCKV 104


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 455 LKMEHDGECQGAKLASLHP 399
           L+M  DG C+     S HP
Sbjct: 106 LRMSADGGCRNFSTCSSHP 124


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 455 LKMEHDGECQGAKLASLHP 399
           L+M  DG C+     S HP
Sbjct: 105 LRMSADGGCRNFSTCSSHP 123


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = -1

Query: 557 PCYCTLEYAPVCGSNGKTYANKCSLE 480
           PCYCT E   +  +  +       L+
Sbjct: 1   PCYCTCEKCKITANRQQVMRQNMKLK 26


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 230 SNGFSFPPPTLCYYR 274
           ++G+ F PP   +YR
Sbjct: 69  ASGYGFVPPNQAFYR 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,493
Number of Sequences: 438
Number of extensions: 3657
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)